Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP315-201ENST00000516340 116 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 SCARNA15.1-201ENST00000516384 125 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP312-201ENST00000517068 116 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RPL23AP97-201ENST00000568955 471 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC009318.2-201ENST00000610917 651 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 PART1_1.1-201ENST00000611761 217 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 ZYXP1-201ENST00000617638 118 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 MIR7154-201ENST00000620673 73 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.314-201ENST00000365114 102 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP22-201ENST00000365393 109 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RNU6-968P-201ENST00000384076 107 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RNU1-13P-201ENST00000384499 162 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RPL23AP25-201ENST00000430973 463 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 OR4C10P-201ENST00000434991 931 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RPL39P29-201ENST00000447779 157 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AL513124.1-201ENST00000450410 614 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RN7SKP210-201ENST00000459176 261 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 RPS27P26-201ENST00000494583 239 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 MIR5696-201ENST00000578474 85 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AL391813.1-201ENST00000603098 260 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AC010201.1-201ENST00000605051 540 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AC006157.1-201ENST00000611750 366 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AC007546.2-201ENST00000623996 360 ntBASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.72□□□□□ -1.65
TRAIPQ9BWF2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRAIPQ9BWF2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.71□□□□□ -1.65
TRAIPQ9BWF2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRAIPQ9BWF2 MTND5P1-201ENST00000445440 1375 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RNU1-14P-201ENST00000362759 152 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RNU6-639P-201ENST00000384074 107 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RNU1-44P-201ENST00000384453 163 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 MIR625-201ENST00000385047 85 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RN7SKP167-201ENST00000411047 285 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 MTCYBP10-201ENST00000424905 650 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RPL23AP81-201ENST00000455252 467 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC016632.1-201ENST00000503994 196 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 SNORA25.10-201ENST00000515926 124 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RNU7-4P-201ENST00000516961 62 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC009812.2-201ENST00000517657 457 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 HSPE1P4-201ENST00000550617 308 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 RN7SL600P-201ENST00000581811 299 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 AC040896.1-201ENST00000613819 479 ntBASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRAIPQ9BWF2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.5-201ENST00000362334 102 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 Y_RNA.31-201ENST00000362574 102 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RNU6-595P-201ENST00000363944 107 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RNA5SP175-201ENST00000364275 119 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RNU6-1141P-201ENST00000364520 107 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RNU6-99P-201ENST00000364721 107 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 SNORA33.2-201ENST00000365413 134 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 SNORA22B-201ENST00000383876 138 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC243428.1-201ENST00000421099 264 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 OSTCP8-201ENST00000445117 448 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RPL30P12-201ENST00000474666 353 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC099522.1-202ENST00000514718 367 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AC115990.1-201ENST00000526957 301 ntBASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.7□□□□□ -1.66
TRAIPQ9BWF2 AL590705.4-201ENST00000532209 134 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms