Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LRFN3Q9BTN0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU4-35P-201ENST00000362588 141 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 SNORD113-7-201ENST00000363762 77 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC117470.1-201ENST00000381974 330 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU6-217P-201ENST00000384164 104 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 SNORA54-201ENST00000384281 123 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU6-45P-201ENST00000384471 107 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU6-985P-201ENST00000410182 104 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RN7SKP58-201ENST00000411010 305 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 SKA2P1-201ENST00000425592 390 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AL590664.1-201ENST00000448065 339 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU7-167P-201ENST00000459160 62 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC008716.1-201ENST00000511084 513 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 MTCO2P24-201ENST00000515611 426 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNU6-189P-201ENST00000516120 101 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 RNA5SP165-201ENST00000517142 115 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 OR11H5P-201ENST00000554039 926 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 MTCO3P23-201ENST00000561363 289 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 MIR3609-201ENST00000582661 80 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC104662.1-201ENST00000604448 511 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 DUSP12P1-201ENST00000612874 516 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC022418.1-201ENST00000624118 445 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AL137790.1-201ENST00000634283 177 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 AC011266.1-201ENST00000624119 3569 ntBASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LRFN3Q9BTN0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RNU6-371P-201ENST00000364283 108 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 SNORD6-201ENST00000365444 73 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 POLHP1-201ENST00000411806 470 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC004552.1-201ENST00000419089 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC006028.1-201ENST00000438379 402 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC107083.1-201ENST00000439643 279 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RANP8-201ENST00000444720 713 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AL035666.1-201ENST00000446195 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 CECR9-201ENST00000453421 199 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 BTF3P15-201ENST00000455606 336 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RPS26P3-201ENST00000470205 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RPL30P14-201ENST00000482744 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC090543.2-201ENST00000483963 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC004057.1-201ENST00000485827 348 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RPS27P27-201ENST00000498779 255 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 SUMO2P6-201ENST00000505273 288 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RNA5SP154-201ENST00000516193 111 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 RNU6-256P-201ENST00000516747 97 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC004805.2-201ENST00000605382 482 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC005014.2-201ENST00000607795 599 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC083806.3-201ENST00000614016 455 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 SNORD39.4-201ENST00000620099 78 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 MIR7843-201ENST00000622274 79 ntBASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LRFN3Q9BTN0 AC007656.2-201ENST00000624902 4547 ntBASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.74□□□□□ -1.81
LRFN3Q9BTN0 Y_RNA.158-201ENST00000363651 101 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms