Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 RPL23AP35-201ENST00000451906 501 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 MTND1P3-201ENST00000484956 952 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC018868.1-201ENST00000491307 315 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 HMGB1P35-201ENST00000503360 598 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-1315P-201ENST00000517187 99 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC109329.1-201ENST00000518744 317 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AP005435.4-201ENST00000529514 284 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 MIR1273C-201ENST00000578669 77 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 SNRPGP17-201ENST00000603780 214 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC080013.3-201ENST00000606839 578 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC091965.4-201ENST00000607691 587 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC068944.2-201ENST00000610373 403 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AL049777.1-201ENST00000622740 518 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC078974.1-201ENST00000411597 223 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 POLHP1-201ENST00000411806 470 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 XKRYP1-201ENST00000423438 492 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AL035407.1-201ENST00000429211 571 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 XKRYP2-201ENST00000432915 492 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 IFNA20P-201ENST00000436840 528 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 snoU109.3-201ENST00000459477 145 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 OR5B19P-201ENST00000531766 928 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC136619.2-201ENST00000563361 631 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC243960.4-201ENST00000600532 288 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 AC022202.1-201ENST00000613515 211 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
BPIFA3Q9BQP9 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AL356432.1-201ENST00000405809 419 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RPS20P15-201ENST00000412792 311 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 MTND6P13-201ENST00000443510 523 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-677P-201ENST00000516914 101 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AL356432.3-201ENST00000568952 465 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AC018638.7-201ENST00000605836 1114 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 AC126118.1-201ENST00000607744 628 ntBASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-433P-201ENST00000363216 104 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-166P-201ENST00000384371 107 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RNU1-57P-201ENST00000384491 166 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RN7SKP192-201ENST00000411291 327 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 HMGB3P12-201ENST00000438745 556 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AL137159.1-201ENST00000452808 512 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RPL23AP42-201ENST00000471152 471 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RPS3AP22-201ENST00000488297 769 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC109927.2-201ENST00000506416 303 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 MTND4P2-201ENST00000507767 1203 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 OR5AL2P-201ENST00000532185 920 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC013828.2-201ENST00000532487 235 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 MIR3146-201ENST00000580367 79 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 RPL30P11-203ENST00000598995 310 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC112187.2-201ENST00000604345 283 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AC021646.1-201ENST00000605469 484 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 AP002371.2-201ENST00000624450 503 ntBASIC1.84□□□□□ -2.11
BPIFA3Q9BQP9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.83□□□□□ -2.12
BPIFA3Q9BQP9 RNA5SP276-201ENST00000362580 94 ntBASIC1.83□□□□□ -2.12
BPIFA3Q9BQP9 Y_RNA.33-201ENST00000362591 102 ntBASIC1.83□□□□□ -2.12
BPIFA3Q9BQP9 RNU6-1010P-201ENST00000362757 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms