Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.14□□□□□ -2.07
NPAS2Q99743 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.14□□□□□ -2.07
NPAS2Q99743 MTND1P12-201ENST00000455231 147 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.14□□□□□ -2.07
NPAS2Q99743 BZW1P2-201ENST00000473537 826 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC068781.1-201ENST00000488231 618 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 RPS29P21-201ENST00000496272 170 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AF131216.2-201ENST00000512316 564 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 SMURF2P1-201ENST00000514992 481 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC026407.1-201ENST00000518369 204 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC011979.2-201ENST00000527568 352 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.14□□□□□ -2.07
NPAS2Q99743 CBX3P7-201ENST00000532876 502 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC009063.1-201ENST00000563342 702 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC109446.2-201ENST00000567872 497 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC012213.3-201ENST00000577199 777 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AL138963.2-201ENST00000605137 226 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC022893.3-201ENST00000607665 437 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC009233.1-201ENST00000616477 371 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AF246928.1-201ENST00000623768 87 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 AC079248.2-201ENST00000623779 326 ntBASIC2.14□□□□□ -2.07
NPAS2Q99743 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPAS2Q99743 AL445523.1-201ENST00000451184 1362 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPAS2Q99743 RNU5F-6P-201ENST00000362979 116 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 RNU6-553P-201ENST00000364047 96 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 RN7SKP158-201ENST00000410453 326 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC107081.1-201ENST00000414975 361 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AL365184.2-201ENST00000431139 435 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 MTND1P26-201ENST00000440488 538 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 RPL7P12-201ENST00000446719 750 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.13□□□□□ -2.07
NPAS2Q99743 RPL23AP49-201ENST00000492925 468 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AC098862.1-201ENST00000504991 413 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC010486.2-201ENST00000505572 483 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC109927.2-201ENST00000506416 303 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC005178.1-201ENST00000508392 440 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.13□□□□□ -2.07
NPAS2Q99743 RNU6-914P-201ENST00000516749 109 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC022616.6-201ENST00000520479 119 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AL157871.3-201ENST00000557231 293 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.13□□□□□ -2.07
NPAS2Q99743 NIFKP6-201ENST00000598115 845 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC025165.5-201ENST00000602802 578 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 WISP1-OT1-201ENST00000602893 642 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.13□□□□□ -2.07
NPAS2Q99743 AL161423.1-201ENST00000613700 262 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 MIR5739-201ENST00000619803 80 ntBASIC2.13□□□□□ -2.07
NPAS2Q99743 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.13□□□□□ -2.07
NPAS2Q99743 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NPAS2Q99743 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPAS2Q99743 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 RNU6-501P-201ENST00000364072 100 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 RNU6-898P-201ENST00000365627 104 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 RNU6-190P-201ENST00000384154 102 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPAS2Q99743 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 RNA5SP425-201ENST00000410336 112 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.12□□□□□ -2.07
NPAS2Q99743 AL353706.1-201ENST00000436728 494 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPAS2Q99743 AL512286.1-201ENST00000439244 400 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.12□□□□□ -2.07
NPAS2Q99743 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 FDX1P2-201ENST00000450769 375 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.12□□□□□ -2.07
NPAS2Q99743 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.12□□□□□ -2.07
NPAS2Q99743 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 RNU5B-3P-201ENST00000516601 115 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC107934.1-201ENST00000522215 217 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 MTCYBP20-201ENST00000524239 1129 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 MTND4LP18-201ENST00000526864 291 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 AC091489.2-201ENST00000566263 604 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 MIR1273C-201ENST00000578669 77 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.12□□□□□ -2.07
NPAS2Q99743 AL670379.10-201ENST00000604330 253 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AL670379.9-201ENST00000605428 253 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC105129.3-201ENST00000605455 485 ntBASIC2.12□□□□□ -2.07
NPAS2Q99743 AC006338.1-201ENST00000618453 749 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms