Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 Z99571.1-201ENST00000636677 394 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 AC013437.2-201ENST00000639587 677 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.62□□□□□ -2.15
VAT1Q99536 TEX21P-201ENST00000447107 1476 ntBASIC1.62□□□□□ -2.15
VAT1Q99536 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAT1Q99536 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAT1Q99536 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VAT1Q99536 AP000648.3-201ENST00000623539 4507 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC099786.3-201ENST00000565735 1410 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 RNU1-23P-201ENST00000363361 144 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 RNU5E-10P-201ENST00000363506 118 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.61□□□□□ -2.15
VAT1Q99536 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
VAT1Q99536 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
VAT1Q99536 POLHP1-201ENST00000411806 470 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 RPS12P24-201ENST00000412619 387 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 VPS26BP1-201ENST00000417155 755 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.61□□□□□ -2.15
VAT1Q99536 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.61□□□□□ -2.15
VAT1Q99536 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 SSXP1-201ENST00000453640 473 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.61□□□□□ -2.15
VAT1Q99536 BZW1P2-201ENST00000473537 826 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 FAM92A1P2-202ENST00000504766 877 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC020699.1-201ENST00000505161 445 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC091965.2-201ENST00000512324 613 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC034114.1-201ENST00000520293 285 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.61□□□□□ -2.15
VAT1Q99536 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.61□□□□□ -2.15
VAT1Q99536 PSMA3P-201ENST00000555485 635 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC023813.2-201ENST00000564321 469 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC005034.5-201ENST00000604219 466 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AL670379.10-201ENST00000604330 253 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 BCRP9-201ENST00000605312 388 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AL670379.9-201ENST00000605428 253 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC112220.3-201ENST00000605502 502 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 AC107952.2-201ENST00000606048 486 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 RNU6-91P-201ENST00000607774 107 ntBASIC1.61□□□□□ -2.15
VAT1Q99536 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
VAT1Q99536 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 RNU6-1032P-201ENST00000384100 107 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 MIR518A2-201ENST00000384966 87 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 MIR504-201ENST00000385065 83 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 RNU4-22P-201ENST00000411058 166 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 SNORD56-201ENST00000413522 71 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 LARP1BP3-201ENST00000437229 869 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 MTND6P13-201ENST00000443510 523 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AC108059.3-201ENST00000456388 214 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.6□□□□□ -2.15
VAT1Q99536 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VAT1Q99536 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 SNORA31.19-201ENST00000517079 126 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 OR5B19P-201ENST00000531766 928 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC027807.1-201ENST00000559921 996 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.6□□□□□ -2.15
VAT1Q99536 MIR544B-201ENST00000582372 78 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 BX248123.2-201ENST00000606318 124 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AL773524.1-201ENST00000614065 229 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 AC091953.2-201ENST00000623979 160 ntBASIC1.6□□□□□ -2.15
VAT1Q99536 MTND4P23-201ENST00000447723 1363 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.59□□□□□ -2.15
VAT1Q99536 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.59□□□□□ -2.15
VAT1Q99536 AC138393.1-203ENST00000327086 343 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 RNU6-769P-201ENST00000384407 104 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VAT1Q99536 RNU6-817P-201ENST00000391083 104 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 MIR1289-2-201ENST00000408360 111 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 MTCO2P20-201ENST00000437339 673 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 BTF3P15-201ENST00000455606 336 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 AMD1P1-201ENST00000457220 922 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 snoU109.1-201ENST00000459339 135 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC117522.2-201ENST00000510049 657 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms