Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 BTF3P7-201ENST00000407097 488 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL356320.1-201ENST00000429616 163 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 RPS15AP9-201ENST00000439856 381 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 USP9YP15-201ENST00000442391 422 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 TAF9P1-201ENST00000445421 515 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 TAF9P2-201ENST00000454958 515 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL583843.1-201ENST00000456070 346 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC109486.1-201ENST00000486833 374 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 RPL23AP49-201ENST00000492925 468 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 FABP5P5-201ENST00000515537 406 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 SNORA25.11-201ENST00000515935 105 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC087241.2-201ENST00000535801 324 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 SNORD53-201ENST00000579969 78 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 MIR548AB-201ENST00000584917 84 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AL022154.1-201ENST00000604698 785 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC005332.10-201ENST00000612725 619 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC024581.2-201ENST00000619986 252 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 AC024940.5-201ENST00000622889 474 ntBASIC2.25□□□□□ -2.05
VPS35Q96QK1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS35Q96QK1 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 RPL23AP32-201ENST00000395315 459 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 Y_RNA.598-201ENST00000410480 95 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC005005.2-201ENST00000420779 380 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC003685.2-201ENST00000422795 395 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 HMGN2P38-201ENST00000423806 265 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 RPS3AP44-201ENST00000425466 790 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 RPL36AP48-201ENST00000485521 314 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC108078.2-201ENST00000510750 236 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AP005902.1-201ENST00000521358 186 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 AP000889.2-201ENST00000532684 490 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 SNRPGP18-201ENST00000553000 214 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC012213.3-201ENST00000577199 777 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC009977.1-201ENST00000586015 570 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC012065.4-201ENST00000602445 679 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AL158032.1-201ENST00000605401 106 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC126118.1-201ENST00000607744 628 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC012360.2-201ENST00000609349 391 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC012409.4-201ENST00000612923 249 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC122133.1-201ENST00000613964 233 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC244517.12-201ENST00000623581 663 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 AC138627.2-201ENST00000624202 601 ntBASIC2.24□□□□□ -2.05
VPS35Q96QK1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS35Q96QK1 MTND4P4-201ENST00000439033 1366 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 RNU6-301P-201ENST00000384277 107 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 MIR558-201ENST00000384920 94 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 MIR1302-8-201ENST00000408342 128 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 RNA5SP508-201ENST00000411327 119 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC009518.2-201ENST00000418056 731 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC097463.2-201ENST00000421074 142 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 MED13P1-201ENST00000428342 171 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 KLF3P2-201ENST00000465138 268 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC018437.1-201ENST00000492214 406 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 RPS15AP11-201ENST00000594193 385 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AL670379.10-201ENST00000604330 253 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AL670379.9-201ENST00000605428 253 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
VPS35Q96QK1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS35Q96QK1 AC064859.1-201ENST00000624741 174 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms