Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AC092451.1-201ENST00000480211 153 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 RNU6-475P-201ENST00000516073 104 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 SNORD116.3-201ENST00000517176 78 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 RNU6-1073P-201ENST00000517182 106 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 AC126177.3-201ENST00000551839 688 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 KLKP1-201ENST00000595979 403 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 AC006023.2-201ENST00000609916 167 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 U6.105-201ENST00000637379 88 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 AL021368.2-201ENST00000606125 5352 ntBASIC4.29□□□□□ -1.72
DDX11Q96FC9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.29□□□□□ -1.72
DDX11Q96FC9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
DDX11Q96FC9 USP8P1-201ENST00000494673 3183 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-600P-201ENST00000362524 99 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-379P-201ENST00000363813 104 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-1026P-201ENST00000384465 108 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-1109P-201ENST00000391187 107 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 RPL21P66-201ENST00000426566 466 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AL359672.1-201ENST00000442302 409 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 RPL21P104-201ENST00000464143 478 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC010285.1-201ENST00000470580 392 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC022493.2-201ENST00000506122 481 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC074250.1-201ENST00000511117 192 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC104136.1-201ENST00000512969 394 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 SNORA70.14-201ENST00000516205 110 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 SCARNA16.2-201ENST00000516520 172 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 SNORA31.20-201ENST00000517111 133 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 RNU6-1231P-201ENST00000517185 103 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 SNORA31.22-201ENST00000517204 135 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 Y_RNA.721-201ENST00000517207 102 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC025423.5-201ENST00000550230 219 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC026371.1-201ENST00000551867 419 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC012119.1-201ENST00000603184 222 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AC002044.1-201ENST00000606707 158 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AL161423.1-201ENST00000613700 262 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 AL359547.2-201ENST00000615810 418 ntBASIC4.28□□□□□ -1.72
DDX11Q96FC9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX11Q96FC9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX11Q96FC9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
DDX11Q96FC9 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX11Q96FC9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
DDX11Q96FC9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
DDX11Q96FC9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 RNU6-288P-201ENST00000363690 104 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 RNU6-629P-201ENST00000384061 103 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AL160275.3-201ENST00000423876 471 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 snoU13.24-201ENST00000458998 104 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC096745.1-201ENST00000509945 370 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC092436.3-201ENST00000511788 257 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC092447.9-201ENST00000603395 144 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AL353748.2-201ENST00000622148 471 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC048347.1-201ENST00000624621 427 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX11Q96FC9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX11Q96FC9 AC116096.1-201ENST00000566804 2314 ntBASIC4.27□□□□□ -1.73
DDX11Q96FC9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX11Q96FC9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX11Q96FC9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX11Q96FC9 RNU6-238P-201ENST00000363313 106 ntBASIC4.26□□□□□ -1.73
DDX11Q96FC9 RNU6-525P-201ENST00000363685 104 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms