Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RNF25Q96BH1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RNF25Q96BH1 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 AC026241.1-201ENST00000517873 2142 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 RN7SKP104-201ENST00000362605 328 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RNU6-1082P-201ENST00000364574 107 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RN7SKP275-201ENST00000364626 301 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RN7SKP124-201ENST00000364730 341 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 SNORD116-21-201ENST00000384507 92 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 MIR548A3-201ENST00000385297 97 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RNU6-383P-201ENST00000410864 94 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RNU2-55P-201ENST00000411146 174 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 AIMP1P2-201ENST00000425294 312 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 AC073465.2-201ENST00000440938 498 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 Vault.1-201ENST00000516474 102 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 RNU7-116P-201ENST00000516940 62 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 MIR4660-201ENST00000583549 74 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 AC108081.1-201ENST00000604358 221 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 AC006133.1-201ENST00000617106 264 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF25Q96BH1 AP001642.1-201ENST00000624727 2117 ntBASIC5.8□□□□□ -1.48
RNF25Q96BH1 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF25Q96BH1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 SNORD114-19-201ENST00000363072 75 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 U8.7-201ENST00000364940 136 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 SNORD18B-201ENST00000365659 72 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 GNG5P5-201ENST00000420444 220 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 HMGN2P27-201ENST00000427352 270 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 RN7SL583P-201ENST00000475692 287 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 AC105137.1-201ENST00000484355 562 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 RNA5SP230-201ENST00000517039 122 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF25Q96BH1 AP005431.1-201ENST00000618479 319 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF25Q96BH1 AC138915.1-201ENST00000565427 1685 ntBASIC5.79□□□□□ -1.48
RNF25Q96BH1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 Y_RNA.622-201ENST00000411091 108 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 Y_RNA.651-201ENST00000459380 103 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC117454.1-201ENST00000491120 168 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC005921.1-201ENST00000510589 286 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 SNORD33.1-201ENST00000516213 88 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 RNU6-1061P-201ENST00000516530 99 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 RNU6-197P-201ENST00000516680 100 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 RNU6-928P-201ENST00000516876 104 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 AP003357.1-201ENST00000604497 148 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC015813.4-201ENST00000610469 179 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC099778.2-201ENST00000610904 211 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC025574.2-201ENST00000615621 514 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 BMS1P21-201ENST00000634565 365 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF25Q96BH1 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 AL022311.1-201ENST00000623726 19416 ntBASIC5.78□□□□□ -1.48
RNF25Q96BH1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RNF25Q96BH1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF25Q96BH1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF25Q96BH1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RNF25Q96BH1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.77□□□□□ -1.49
RNF25Q96BH1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF25Q96BH1 USP8P1-201ENST00000494673 3183 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
RNF25Q96BH1 SNORA73.1-201ENST00000363107 205 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNU6-32P-201ENST00000383948 107 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNU6-13P-201ENST00000384248 107 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNU6-12P-201ENST00000384604 107 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNU6-136P-201ENST00000384663 107 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNU6-41P-201ENST00000384741 107 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 AC007161.1-204ENST00000423039 460 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF25Q96BH1 RPS3P1-201ENST00000456781 192 ntBASIC5.77□□□□□ -1.49
RNF25Q96BH1 RNA5SP271-201ENST00000516700 88 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms