Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-1284P-201ENST00000363701 100 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 RNU6-769P-201ENST00000384407 104 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 RNU2-68P-201ENST00000410878 191 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AL117351.1-201ENST00000438864 766 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 FCF1P6-201ENST00000456841 595 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 MRPS33P3-201ENST00000513456 322 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 MTCYBP23-201ENST00000558717 1102 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC012435.1-202ENST00000568772 240 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 SEPT7P9-203ENST00000604116 343 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 RNU4-5P-201ENST00000607255 135 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC097468.3-201ENST00000607956 456 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC112204.3-201ENST00000623822 332 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AL359854.1-201ENST00000614203 1594 ntBASIC1.51□□□□□ -2.17
LMX1AQ8TE12 AC103710.2-202ENST00000641454 2853 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 RNU6-723P-201ENST00000383973 107 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 RNU1-57P-201ENST00000384491 166 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AL512604.1-201ENST00000404812 257 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 RPS24P7-201ENST00000416921 246 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC084290.1-201ENST00000434995 374 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 LARP1BP3-201ENST00000437229 869 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 PMCHL2-203ENST00000457791 237 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC117503.1-201ENST00000472241 394 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 RNU6-390P-201ENST00000516259 103 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 RNU6-64P-201ENST00000517119 105 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC006199.1-201ENST00000548728 219 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 MIR4765-201ENST00000585007 77 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC005034.5-201ENST00000604219 466 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AL355472.4-201ENST00000610233 626 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AC005296.1-201ENST00000616145 209 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.5□□□□□ -2.17
LMX1AQ8TE12 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
LMX1AQ8TE12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL391987.6-201ENST00000305671 199 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 NACAP2-201ENST00000318548 624 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 MIR676-201ENST00000390702 67 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 RPS15AP12-201ENST00000419498 388 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 GPM6BP2-201ENST00000432046 144 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 GPM6BP1-201ENST00000446387 144 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL136380.1-201ENST00000447970 162 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 SNRPFP4-201ENST00000456366 242 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AMD1P1-201ENST00000457220 922 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 MTCO1P42-201ENST00000457379 726 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 RPL23AP41-201ENST00000484754 458 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 RNA5SP112-201ENST00000515937 99 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 RNA5SP137-201ENST00000516833 135 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AP006587.4-201ENST00000526053 529 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 MIR544B-201ENST00000582372 78 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL391001.1-201ENST00000602747 715 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 DPPA3P3-201ENST00000603842 430 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL355598.1-201ENST00000604169 202 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AC072039.2-201ENST00000608883 439 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AC097478.2-201ENST00000610572 514 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AC011939.3-201ENST00000613686 466 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
LMX1AQ8TE12 AL445984.1-201ENST00000637834 659 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
LMX1AQ8TE12 MTND4P9-201ENST00000507819 1346 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms