Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AL158211.2-201ENST00000607282 395 ntBASIC1.32□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-91P-201ENST00000607774 107 ntBASIC1.32□□□□□ -2.2
RPS4Y2Q8TD47 AL121895.2-201ENST00000619558 447 ntBASIC1.32□□□□□ -2.2
RPS4Y2Q8TD47 LINC02211-204ENST00000642024 1070 ntBASIC1.32□□□□□ -2.2
RPS4Y2Q8TD47 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 U8.3-201ENST00000363321 132 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 RNU1-42P-201ENST00000364033 160 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 MIR518D-201ENST00000385014 87 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 SNORA40.19-201ENST00000390846 128 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-298P-201ENST00000390888 96 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AL591034.2-201ENST00000402839 359 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AL359704.1-201ENST00000411586 781 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC244636.1-201ENST00000421152 228 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 MTND6P13-201ENST00000443510 523 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 SSXP1-201ENST00000453640 473 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 CKS1BP2-201ENST00000497342 240 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 MTCYBP35-201ENST00000503630 1137 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 SUMO2P5-201ENST00000506790 245 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC022880.1-201ENST00000534017 973 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC034229.4-201ENST00000607861 441 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AC245297.2-201ENST00000610119 565 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 AP000776.1-201ENST00000530032 1663 ntBASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.31□□□□□ -2.2
RPS4Y2Q8TD47 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-1280P-201ENST00000365211 107 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 MIR1302-8-201ENST00000408342 128 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 HMGB1P27-201ENST00000431429 603 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC140059.1-201ENST00000489238 361 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC023194.1-201ENST00000493084 308 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AP006587.4-201ENST00000526053 529 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC092451.2-201ENST00000538746 658 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RPS3AP4-201ENST00000555161 764 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 MIR4285-201ENST00000581001 85 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC126118.1-201ENST00000607744 628 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC092574.1-201ENST00000609771 420 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-1192P-201ENST00000612197 107 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-489P-201ENST00000618289 107 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC091953.2-201ENST00000623979 160 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 AC099654.9-201ENST00000637055 678 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 U6.99-201ENST00000637524 83 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 TEX21P-201ENST00000447107 1476 ntBASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPS4Y2Q8TD47 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 SNORA8-201ENST00000384574 139 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 USP9YP33-201ENST00000412220 421 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 AL513185.2-201ENST00000425543 193 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 USP9YP35-201ENST00000435696 412 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 MTND2P29-201ENST00000438595 412 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 KATNBL1P6-201ENST00000453433 915 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 MTND1P16-201ENST00000465177 898 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 Y_RNA.675-201ENST00000516389 149 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 OR5B19P-201ENST00000531766 928 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 PSMA3P-201ENST00000555485 635 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 MIR4782-201ENST00000577987 79 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 SEPT7P9-203ENST00000604116 343 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 AL358072.1-201ENST00000604156 575 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 NDUFA8P1-201ENST00000605525 367 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 Z99571.1-201ENST00000636677 394 ntBASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RPS4Y2Q8TD47 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 RNA5SP432-201ENST00000362480 116 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 RNU1-23P-201ENST00000363361 144 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 RNU6-413P-201ENST00000384115 107 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 Y_RNA.472-201ENST00000384322 102 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 MIR517C-201ENST00000385103 95 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 AC068050.1-201ENST00000394891 380 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 AC078974.1-201ENST00000411597 223 ntBASIC1.28□□□□□ -2.2
RPS4Y2Q8TD47 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms