Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RPS29P12-201ENST00000460178 152 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 AC103810.1-201ENST00000579873 453 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 HMGN1P30-201ENST00000589286 268 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 AC010620.1-201ENST00000601088 1102 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 AC090578.1-201ENST00000604955 591 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 ZNF720P1-201ENST00000562403 1939 ntBASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL27A1Q8IZC6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 RNU6-809P-201ENST00000384461 107 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 RNY3P10-201ENST00000384764 102 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 SNORA40C-201ENST00000391285 128 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 RPS3AP3-201ENST00000411933 242 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 SNRPEP9-201ENST00000436794 238 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 HIGD1AP11-201ENST00000438361 280 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 RPS15AP27-201ENST00000449183 343 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 MTATP6P7-201ENST00000453315 681 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 MTND1P12-201ENST00000455231 147 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC009901.1-201ENST00000506703 541 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AP003072.2-201ENST00000527756 676 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AP003122.4-201ENST00000530980 758 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 GLYCAM1-201ENST00000546596 285 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AL391261.3-201ENST00000557194 520 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC040904.1-201ENST00000590850 223 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 RPL23AP88-201ENST00000605759 454 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AL359547.2-201ENST00000615810 418 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 AC009090.3-201ENST00000616553 565 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 MIR7111-201ENST00000619751 72 ntBASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.78□□□□□ -2.12
COL27A1Q8IZC6 Y_RNA.118-201ENST00000363300 101 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 Y_RNA.164-201ENST00000363709 102 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 Y_RNA.238-201ENST00000364441 102 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RNU1-39P-201ENST00000383897 165 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 ELOCP4-201ENST00000420090 333 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC009961.2-201ENST00000435771 251 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RPS24P1-201ENST00000438550 371 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 MTND1P27-201ENST00000451117 902 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RPS27AP8-201ENST00000452665 445 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RPL23AP70-201ENST00000483361 460 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 MTND1P3-201ENST00000484956 952 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RPL23AP63-201ENST00000498752 471 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RNU7-51P-201ENST00000516560 62 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC119751.7-201ENST00000600494 245 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL355877.2-201ENST00000603670 358 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC239868.4-201ENST00000608318 671 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC092140.2-201ENST00000618027 521 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC072046.2-201ENST00000618366 268 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC006338.1-201ENST00000618453 749 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 UCA1.1-201ENST00000620952 75 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC090582.1-201ENST00000636321 199 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL390237.1-201ENST00000404226 1415 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 U8.3-201ENST00000363321 132 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC127391.1-201ENST00000411737 98 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 HMGN1P14-201ENST00000412459 517 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AP1B1P2-201ENST00000416196 106 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 ARL4AP2-201ENST00000507378 601 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 Y_RNA.672-201ENST00000516289 104 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RNU6-572P-201ENST00000516724 80 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 RNU6-250P-201ENST00000516958 103 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 SNORA31.26-201ENST00000517250 137 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 COX6CP5-201ENST00000527162 228 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 ADI1P3-201ENST00000549509 470 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 AC005951.2-201ENST00000576282 495 ntBASIC1.77□□□□□ -2.13
COL27A1Q8IZC6 MIR4782-201ENST00000577987 79 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms