Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TLK1P1-201ENST00000456760 2440 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PACS2Q86VP3 RN7SKP104-201ENST00000362605 328 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 SNORD115-30-201ENST00000364117 82 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 Y_RNA.415-201ENST00000384012 112 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 SNORA18.3-201ENST00000384122 132 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 SNORA26.3-201ENST00000391119 136 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 FTH1P15-201ENST00000406984 280 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RNU6-710P-201ENST00000410424 105 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AL158147.1-201ENST00000443970 75 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC125238.1-201ENST00000448842 249 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RNU7-141P-201ENST00000459304 62 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC010285.1-201ENST00000470580 392 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RPS17P15-201ENST00000475609 349 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RPSAP50-201ENST00000481955 852 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 SNORA70.16-201ENST00000516390 95 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 Y_RNA.677-201ENST00000516401 85 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RNU6-1061P-201ENST00000516530 99 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 RNU6-537P-201ENST00000517277 103 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC006199.1-201ENST00000548728 219 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PACS2Q86VP3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AC118273.1-201ENST00000525324 3006 ntBASIC5.29□□□□□ -1.56
PACS2Q86VP3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PACS2Q86VP3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PACS2Q86VP3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 Y_RNA.368-201ENST00000365547 113 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 MIR548A3-201ENST00000385297 97 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 SNORA17A-201ENST00000391185 133 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 RNU6-855P-201ENST00000410395 104 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 AC108751.2-201ENST00000469993 231 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.28□□□□□ -1.56
PACS2Q86VP3 SNORA31.16-201ENST00000516773 139 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 AC021678.3-201ENST00000517893 476 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 MIR4724-201ENST00000579485 89 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 AL356575.1-201ENST00000603008 283 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 AC090607.5-201ENST00000615692 224 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 AP005431.1-201ENST00000618479 319 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 SNORA17.5-201ENST00000630429 132 ntBASIC5.28□□□□□ -1.56
PACS2Q86VP3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
PACS2Q86VP3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PACS2Q86VP3 AC073073.2-201ENST00000609827 2578 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC107027.3-201ENST00000565095 3473 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PACS2Q86VP3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.27□□□□□ -1.57
PACS2Q86VP3 Y_RNA.116-201ENST00000363292 103 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 U3.9-201ENST00000363823 204 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 Y_RNA.341-201ENST00000365341 102 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC019205.3-201ENST00000424573 156 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.27□□□□□ -1.57
PACS2Q86VP3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC064862.4-201ENST00000442180 334 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 RN7SL570P-201ENST00000484405 292 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 Y_RNA.692-201ENST00000516627 105 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 AC025946.2-201ENST00000603398 234 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 U2.21-201ENST00000637295 81 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 LINC01355-201ENST00000566551 5444 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PACS2Q86VP3 OR13C1P-202ENST00000641378 2919 ntBASIC5.27□□□□□ -1.57
PACS2Q86VP3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 AL360270.2-201ENST00000562952 5985 ntBASIC5.26□□□□□ -1.57
PACS2Q86VP3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PACS2Q86VP3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PACS2Q86VP3 AL672167.1-203ENST00000641299 2975 ntBASIC5.26□□□□□ -1.57
PACS2Q86VP3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PACS2Q86VP3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PACS2Q86VP3 NEAT1-202ENST00000501122 22743 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms