Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RAD17P1-201ENST00000418130 2042 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNA5SP52-201ENST00000362448 134 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU5A-1-201ENST00000362698 116 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.71-201ENST00000362892 104 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU6-653P-201ENST00000363074 106 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU6-626P-201ENST00000363354 107 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.127-201ENST00000363386 109 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 SNORD14B-201ENST00000364533 90 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU4-9P-201ENST00000364951 139 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC068538.1-201ENST00000376856 336 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RNU2-52P-201ENST00000410680 190 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RPL7AP25-201ENST00000423357 805 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC011742.1-201ENST00000431448 434 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 SEPT7P4-201ENST00000437076 306 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC009296.1-201ENST00000443146 155 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 PTMAP3-201ENST00000447474 330 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC091179.1-201ENST00000461606 579 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 RPL21P126-201ENST00000470049 478 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC097462.2-201ENST00000504623 481 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC008694.2-201ENST00000517591 306 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AP005660.1-201ENST00000522972 293 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC112693.2-201ENST00000556538 232 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC116447.1-201ENST00000613153 453 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AL138721.1-201ENST00000616756 179 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.778-201ENST00000620203 90 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AL596275.2-206ENST00000641957 626 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC090971.4-201ENST00000560291 1800 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AP000756.2-201ENST00000624168 2567 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 A2MP1-204ENST00000566278 4130 ntBASIC4.02□□□□□ -1.77
ATG4DQ86TL0 AC010329.2-201ENST00000595195 2737 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC010332.2-201ENST00000613083 1904 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC006971.1-201ENST00000407916 4486 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 MIR412-201ENST00000362142 91 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 SNORA62-201ENST00000365493 153 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RNU6-20P-201ENST00000384106 107 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 SNORA46.1-201ENST00000391069 153 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 ELOCP19-201ENST00000411919 318 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RPS20P14-201ENST00000412545 360 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 COX6B1P7-201ENST00000430845 235 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RPL10P17-201ENST00000453852 316 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AP000870.1-201ENST00000472927 406 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC117440.1-201ENST00000474107 571 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RPL26P26-201ENST00000480251 434 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 RNU6-1234P-201ENST00000516877 103 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 BNIP3P5-201ENST00000562290 498 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 MIR4679-1-201ENST00000637619 75 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 OR56B2P-202ENST00000641377 2453 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 AC015813.6-201ENST00000624409 5808 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 MFSD8-242ENST00000641690 4199 ntBASIC4.01□□□□□ -1.77
ATG4DQ86TL0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4DQ86TL0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4□□□□□ -1.77
ATG4DQ86TL0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
ATG4DQ86TL0 AL451142.2-201ENST00000429076 2090 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms