Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 AC138761.3-201ENST00000579993 334 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 SRGNP1-201ENST00000603392 451 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 IGHV3-29-201ENST00000604817 344 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 AC016925.2-201ENST00000605108 242 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 YPEL5P2-201ENST00000605553 359 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 AC008121.3-201ENST00000618726 433 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.36□□□□□ -1.87
SHC4Q6S5L8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHC4Q6S5L8 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
SHC4Q6S5L8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHC4Q6S5L8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 Y_RNA.145-201ENST00000363527 102 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 Y_RNA.399-201ENST00000383955 105 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 SNORD70.1-201ENST00000391007 85 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AL360182.1-201ENST00000397433 468 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC004866.2-201ENST00000438285 481 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 MTND3P2-201ENST00000438452 342 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC104058.1-201ENST00000448028 297 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC087884.1-201ENST00000469738 328 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC117503.1-201ENST00000472241 394 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RPL32P34-201ENST00000486380 400 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC008526.1-201ENST00000509149 338 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RNU2-69P-201ENST00000516061 100 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RNU6-1069P-201ENST00000516612 133 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RNU6-1213P-201ENST00000517075 94 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 SNORA31.22-201ENST00000517204 135 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 MIR5692C1-201ENST00000585309 91 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC136443.5-201ENST00000603741 370 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 AC019193.3-201ENST00000609144 554 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.35□□□□□ -1.87
SHC4Q6S5L8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.35□□□□□ -1.87
SHC4Q6S5L8 SNORD46.1-201ENST00000364139 104 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 RNU6-715P-201ENST00000365204 103 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 Y_RNA.422-201ENST00000384054 114 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 U3.19-201ENST00000390893 196 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 EI24P1-201ENST00000416584 867 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC113618.1-201ENST00000416747 285 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 TRBV1-201ENST00000476502 284 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 RPS29P2-201ENST00000479278 136 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 RPS27P27-201ENST00000498779 255 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 MTCYBP40-201ENST00000509390 1135 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 TBCAP3-201ENST00000512475 312 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 RNU6-1137P-201ENST00000517073 99 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC093012.1-202ENST00000549403 582 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 SNRPGP18-201ENST00000553000 214 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AC007998.5-201ENST00000622938 237 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 MTND5P42-201ENST00000637720 498 ntBASIC3.34□□□□□ -1.87
SHC4Q6S5L8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHC4Q6S5L8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.34□□□□□ -1.88
SHC4Q6S5L8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 Y_RNA.112-201ENST00000363250 102 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 Y_RNA.482-201ENST00000384377 111 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 RNU6-310P-201ENST00000384655 107 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 CISD1P1-201ENST00000393907 327 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 MIR450B-201ENST00000401182 78 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 RNU2-43P-201ENST00000410306 190 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL451074.5-201ENST00000415894 435 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 RPLP0P7-201ENST00000416050 667 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 RPL7P37-201ENST00000425095 738 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 FABP5P13-201ENST00000452144 328 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 RNU7-167P-201ENST00000459160 62 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AC009901.1-201ENST00000506703 541 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AC079140.5-201ENST00000507882 310 ntBASIC3.33□□□□□ -1.88
SHC4Q6S5L8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC4Q6S5L8 PTP4A1P4-201ENST00000512479 322 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms