Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR4298-201ENST00000584380 73 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 HMGB1P24-202ENST00000615653 685 ntBASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.81□□□□□ -1.64
PRPF40BQ6NWY9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-37P-201ENST00000362692 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-11P-201ENST00000364234 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNA5SP51-201ENST00000364750 119 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-7-201ENST00000364784 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-8-201ENST00000365467 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-25P-201ENST00000383873 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-1-201ENST00000383898 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-629P-201ENST00000384061 103 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-48P-201ENST00000384161 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-36P-201ENST00000384172 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-4P-201ENST00000384205 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-5P-201ENST00000384238 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-3P-201ENST00000384314 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-16P-201ENST00000384385 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 SNORA51.11-201ENST00000384442 131 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-15P-201ENST00000384534 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-2-201ENST00000384627 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-29P-201ENST00000384637 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-9-201ENST00000384776 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-33P-201ENST00000384793 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR521-1-201ENST00000384902 87 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR634-201ENST00000385208 97 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR1302-6-201ENST00000408466 90 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC004552.1-201ENST00000419089 348 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC092423.1-201ENST00000430165 186 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC011742.1-201ENST00000431448 434 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 CYCSP32-201ENST00000440548 321 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC073910.1-201ENST00000445047 438 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 CHEK2P4-201ENST00000450340 246 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 U8.21-201ENST00000459536 136 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RPS26P3-201ENST00000470205 348 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC090543.2-201ENST00000483963 348 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC004057.1-201ENST00000485827 348 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC025445.1-201ENST00000502728 300 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AC093852.1-201ENST00000503587 266 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RN7SKP18-201ENST00000516005 275 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-1143P-201ENST00000516125 104 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU2-53P-201ENST00000516257 147 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 SNORA40.15-201ENST00000516884 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 GNRHR2P1-201ENST00000555315 631 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 CPDP1-201ENST00000579660 283 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 VN1R91P-201ENST00000594377 169 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 RNU6-6P-201ENST00000606623 107 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR1244-1-201ENST00000612829 85 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR1244-3-201ENST00000635744 85 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR1244-2-201ENST00000636449 85 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MIR1244-4-202ENST00000636813 85 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 U6.104-201ENST00000637979 90 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 AL136964.1-201ENST00000622038 2990 ntBASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.8□□□□□ -1.64
PRPF40BQ6NWY9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 RPL9P7-201ENST00000330965 580 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 MIR412-201ENST00000362142 91 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.447-201ENST00000384184 113 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.552-201ENST00000384665 112 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 RPL21P1-201ENST00000399532 476 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AL591034.2-201ENST00000402839 359 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AL513043.1-201ENST00000439124 535 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 RPL9P9-202ENST00000466501 579 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 RPL7P5-201ENST00000471472 736 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC125232.2-201ENST00000592457 143 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 SNRPGP15-201ENST00000600149 222 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC009314.1-201ENST00000603871 304 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AP000787.2-201ENST00000604432 568 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC005000.2-201ENST00000605468 310 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC004852.3-201ENST00000614131 326 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC103858.2-201ENST00000621471 543 ntBASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
PRPF40BQ6NWY9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 Y_RNA.111-201ENST00000363248 100 ntBASIC4.78□□□□□ -1.64
PRPF40BQ6NWY9 RNU4-50P-201ENST00000364361 141 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms