Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PPP4R3AQ6IN85 AC006026.1-201ENST00000444025 1803 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 RNU1-75P-201ENST00000347264 129 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 Y_RNA.33-201ENST00000362591 102 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 Y_RNA.813-201ENST00000364639 102 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 SNORA14A-201ENST00000364773 135 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 Y_RNA.535-201ENST00000384612 99 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 EI24P2-201ENST00000397776 1076 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 VN1R36P-201ENST00000414936 291 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AL356968.1-201ENST00000416622 474 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 MTND4P28-201ENST00000426217 387 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 Z82210.1-201ENST00000440037 231 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 RN7SL442P-201ENST00000473804 320 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 RNU6-323P-201ENST00000521915 107 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 IGHV3-76-201ENST00000522465 295 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 HPRT1P3-201ENST00000539521 576 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 HMGB1P14-201ENST00000557424 591 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 MIR3941-201ENST00000582572 103 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 BNIP3P22-201ENST00000593399 556 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AL670379.10-201ENST00000604330 253 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AC136601.2-201ENST00000604356 474 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 HSPE1P7-201ENST00000604681 321 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AL670379.9-201ENST00000605428 253 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 Z83843.1-201ENST00000604070 3685 ntBASIC3.79□□□□□ -1.8
PPP4R3AQ6IN85 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC103988.1-201ENST00000566382 2177 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 Y_RNA.67-201ENST00000362870 100 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 RNU6-266P-201ENST00000364225 107 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 RNU6-1013P-201ENST00000384180 107 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AL512844.2-201ENST00000433990 593 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC074250.1-201ENST00000511117 192 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 RNU6-1069P-201ENST00000516612 133 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC025755.1-201ENST00000521306 278 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 MIR4276-201ENST00000584832 70 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 FAM157A-202ENST00000615155 405 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 AL031601.2-202ENST00000622650 282 ntBASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.78□□□□□ -1.8
PPP4R3AQ6IN85 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC138393.1-203ENST00000327086 343 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 Y_RNA.11-201ENST00000362375 109 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNU6-395P-201ENST00000365662 106 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNU6-140P-201ENST00000384566 108 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 U3.19-201ENST00000390893 196 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNA5SP44-201ENST00000410446 133 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC233279.1-201ENST00000455300 423 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC092798.1-201ENST00000458542 409 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RN7SL601P-201ENST00000471221 293 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 MTND4LP22-201ENST00000508209 276 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNU1-86P-201ENST00000516108 154 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 Y_RNA.691-201ENST00000516611 103 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNU1-107P-201ENST00000516617 154 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 RNU6-1332P-201ENST00000516666 104 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC135507.2-201ENST00000612443 309 ntBASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
PPP4R3AQ6IN85 MTND5P1-201ENST00000445440 1375 ntBASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 AL049641.1-201ENST00000441055 1948 ntBASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 RNU4-79P-201ENST00000362764 141 ntBASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 Y_RNA.474-201ENST00000384341 102 ntBASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PPP4R3AQ6IN85 MIR548F5-201ENST00000408421 86 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms