Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC020661.2-201ENST00000560114 134 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 MTCO3P23-201ENST00000561363 289 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 MIR3921-201ENST00000577308 85 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 MIR4276-201ENST00000584832 70 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 AC099778.2-201ENST00000610904 211 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 SNORD39.4-201ENST00000620099 78 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 SNORA50A-202ENST00000629536 136 ntBASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
CCDC178Q5BJE1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.146-201ENST00000363549 102 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.445-201ENST00000384168 102 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.473-201ENST00000384333 102 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 RPL7P37-201ENST00000425095 738 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL356867.1-201ENST00000429623 299 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 RPL23AP69-201ENST00000431134 458 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 PIGFP3-201ENST00000441918 722 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC087588.1-201ENST00000462203 316 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC021205.2-201ENST00000480069 347 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC078918.1-201ENST00000498515 228 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC110794.1-201ENST00000505816 425 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC074250.1-201ENST00000511117 192 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC093303.1-201ENST00000514549 295 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 RNA5SP290-201ENST00000517133 127 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC087854.1-201ENST00000519706 414 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC026371.1-201ENST00000551867 419 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL163153.1-201ENST00000554223 283 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 MIR5690-201ENST00000583739 73 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 MIR3171-201ENST00000584270 74 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 SRGNP1-201ENST00000603392 451 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC073657.2-201ENST00000605661 303 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AL031601.2-202ENST00000622650 282 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC244517.12-201ENST00000623581 663 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 AC134503.1-201ENST00000633048 54 ntBASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC178Q5BJE1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.135-201ENST00000363439 95 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-1188P-201ENST00000363795 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-128P-201ENST00000383976 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-214P-201ENST00000384130 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-474P-201ENST00000384243 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 Y_RNA.482-201ENST00000384377 111 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-692P-201ENST00000384496 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-306P-201ENST00000384617 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 MIR301A-201ENST00000385261 86 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 HSPE1P26-201ENST00000405341 275 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 HMGB1P9-201ENST00000429856 646 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 GPM6BP2-201ENST00000432046 144 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 GPM6BP1-201ENST00000446387 144 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RN7SL807P-201ENST00000470923 297 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 PHBP14-201ENST00000512887 367 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 SNORA70.16-201ENST00000516390 95 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU1-54P-201ENST00000517181 120 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC104576.1-201ENST00000524225 88 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC004024.1-201ENST00000549244 247 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AL080274.1-201ENST00000605565 220 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNU6-85P-201ENST00000605989 107 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 RNVU1-4-201ENST00000612985 164 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AC040896.1-201ENST00000613819 479 ntBASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CCDC178Q5BJE1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC178Q5BJE1 MTND5P1-201ENST00000445440 1375 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms