Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 RNU6-166P-201ENST00000384371 107 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 UBE2V1P2-201ENST00000397758 440 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SSX1Q16384 FTH1P15-201ENST00000406984 280 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 RNU6-1140P-201ENST00000410517 106 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 RN7SKP223-201ENST00000410582 62 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 SNORD56-201ENST00000413522 71 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 MTCO2P21-201ENST00000419780 677 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.53□□□□□ -2.16
SSX1Q16384 AL139415.2-201ENST00000431968 163 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC084290.1-201ENST00000434995 374 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX1Q16384 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.53□□□□□ -2.16
SSX1Q16384 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.53□□□□□ -2.16
SSX1Q16384 MTCO1P42-201ENST00000457379 726 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 MTND4P16-201ENST00000466108 1367 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.53□□□□□ -2.16
SSX1Q16384 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX1Q16384 AC018868.1-201ENST00000491307 315 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC104685.1-201ENST00000502445 371 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 MTND4P2-201ENST00000507767 1203 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 MTND4P9-201ENST00000507819 1346 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
SSX1Q16384 SNORA4.4-201ENST00000515921 135 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 RNU6-914P-201ENST00000516749 109 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 SNORA48.11-201ENST00000517015 89 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX1Q16384 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX1Q16384 DEFB122-202ENST00000569013 197 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SSX1Q16384 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SSX1Q16384 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.53□□□□□ -2.16
SSX1Q16384 AC078899.2-201ENST00000595282 212 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC013244.3-201ENST00000605614 388 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC107952.2-201ENST00000606048 486 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC022893.3-201ENST00000607665 437 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC092953.2-201ENST00000608000 699 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC009974.1-201ENST00000608881 455 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 AC005296.1-201ENST00000616145 209 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.53□□□□□ -2.16
SSX1Q16384 IGHVIII-44-202ENST00000636235 289 ntBASIC1.53□□□□□ -2.16
SSX1Q16384 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
SSX1Q16384 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SSX1Q16384 AC138393.1-203ENST00000327086 343 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6-511P-201ENST00000363496 107 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 SNORA25B-201ENST00000365507 128 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6-83P-201ENST00000384568 112 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6-906P-201ENST00000384700 70 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 MIR9-3-201ENST00000385084 90 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL591034.2-201ENST00000402839 359 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL512604.1-201ENST00000404812 257 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6-1025P-201ENST00000410629 104 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU2-62P-201ENST00000410868 191 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 PGBD4P6-201ENST00000421501 610 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC096920.1-201ENST00000423991 241 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.52□□□□□ -2.17
SSX1Q16384 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.52□□□□□ -2.17
SSX1Q16384 AL591212.2-201ENST00000433923 257 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.52□□□□□ -2.17
SSX1Q16384 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC109927.2-201ENST00000506416 303 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 HSPE1P23-201ENST00000509838 286 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 RNU6-1315P-201ENST00000517187 99 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC123904.2-201ENST00000548059 300 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 PSMA3P-201ENST00000555485 635 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL031274.2-201ENST00000599419 203 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AP000860.1-201ENST00000605250 559 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 NDUFA8P1-201ENST00000605525 367 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AL139418.1-201ENST00000613613 177 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC130324.3-201ENST00000614165 542 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 uc_338.12-201ENST00000616344 181 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC021755.4-201ENST00000616620 456 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 AC103706.2-201ENST00000638080 240 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 ZNF702P-202ENST00000434269 1966 ntBASIC1.52□□□□□ -2.17
SSX1Q16384 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SSX1Q16384 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SSX1Q16384 ZNF29P-201ENST00000225587 168 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 RNU5E-6P-201ENST00000365574 115 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 MIR620-201ENST00000385232 95 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SSX1Q16384 MIR1294-201ENST00000408503 142 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 RNA5SP508-201ENST00000411327 119 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 POLHP1-201ENST00000411806 470 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 RPL23AP39-201ENST00000415533 405 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AL445685.2-201ENST00000422551 342 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.51□□□□□ -2.17
SSX1Q16384 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.51□□□□□ -2.17
SSX1Q16384 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.51□□□□□ -2.17
SSX1Q16384 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.51□□□□□ -2.17
SSX1Q16384 RPL23AP3-201ENST00000453844 468 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AL139824.2-201ENST00000458731 1095 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AC020699.1-201ENST00000505161 445 ntBASIC1.51□□□□□ -2.17
SSX1Q16384 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.51□□□□□ -2.17
SSX1Q16384 AC117522.2-201ENST00000510049 657 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms