| ZIC1 | Q15915 | AC010889.1-201 | ENST00000566193 | 2666 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | CEP57L1-203 | ENST00000368970 | 1680 nt | APPRIS ALT2 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | ADAM3A-203 | ENST00000461344 | 2157 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | GABRG2-209 | ENST00000638660 | 3799 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR6073-201 | ENST00000352083 | 89 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-181P-201 | ENST00000363225 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-1097P-201 | ENST00000363586 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | U8.8-201 | ENST00000365399 | 135 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | Y_RNA.359-201 | ENST00000365498 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | IVNS1ABP-201 | ENST00000367497 | 746 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | EEF1E1-201 | ENST00000379715 | 1077 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | DEFA7P-201 | ENST00000382676 | 285 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-301P-201 | ENST00000384277 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | BCL2L11-207 | ENST00000405953 | 425 nt | TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC004014.1-201 | ENST00000413406 | 538 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | CDK8P2-201 | ENST00000415020 | 547 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL160275.3-201 | ENST00000423876 | 471 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AP001117.1-201 | ENST00000428205 | 609 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL358934.1-201 | ENST00000432346 | 324 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC104389.3-201 | ENST00000445629 | 235 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC107626.1-201 | ENST00000471084 | 183 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | TRBV1-201 | ENST00000476502 | 284 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC079943.2-201 | ENST00000488999 | 716 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC097460.1-201 | ENST00000514624 | 590 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC110296.1-201 | ENST00000515680 | 341 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-445P-201 | ENST00000516949 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MTCO2P4-201 | ENST00000517968 | 247 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | LINC02545-201 | ENST00000525381 | 306 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AP003730.2-202 | ENST00000527281 | 774 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC021269.2-201 | ENST00000532318 | 330 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC007368.1-201 | ENST00000536422 | 974 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC090023.1-201 | ENST00000545750 | 443 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC006199.1-201 | ENST00000548728 | 219 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC090049.1-201 | ENST00000551075 | 1011 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC073591.1-201 | ENST00000552736 | 597 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC091544.4-201 | ENST00000555268 | 342 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC027807.1-201 | ENST00000559921 | 996 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | LINC2194-202 | ENST00000567624 | 506 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC015813.2-201 | ENST00000578794 | 711 nt | APPRIS P1 TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC103810.1-201 | ENST00000579873 | 453 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC007948.1-201 | ENST00000581632 | 242 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC005261.5-201 | ENST00000596280 | 355 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL022154.1-201 | ENST00000604698 | 785 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC067747.1-201 | ENST00000608026 | 250 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC005332.10-201 | ENST00000612725 | 619 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR1291-201 | ENST00000627649 | 87 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | DYNC2H1-202 | ENST00000375735 | 13678 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | OR8K3-203 | ENST00000641662 | 2438 nt | APPRIS P1 BASIC | 2.3 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | CASC1-205 | ENST00000545133 | 2146 nt | APPRIS ALT2 TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | CKAP2P1-201 | ENST00000555477 | 2049 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | TTC6-201 | ENST00000267368 | 1681 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | Y_RNA.51-201 | ENST00000362725 | 102 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-395P-201 | ENST00000365662 | 106 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR1-2-201 | ENST00000384961 | 85 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | DEFB108C-201 | ENST00000400154 | 252 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL356057.2-201 | ENST00000403318 | 432 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL031779.1-201 | ENST00000415663 | 330 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC007560.1-201 | ENST00000426912 | 237 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | LINC01724-201 | ENST00000430519 | 621 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC092427.1-202 | ENST00000430569 | 476 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC025038.1-201 | ENST00000433249 | 336 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AF274573.2-201 | ENST00000437772 | 520 nt | TSL 5 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | DPPA3P1-201 | ENST00000448050 | 469 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | C1DP4-201 | ENST00000455429 | 424 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | LAMTOR3P2-201 | ENST00000504479 | 232 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | LINC02494-201 | ENST00000509824 | 427 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC117522.2-201 | ENST00000510049 | 657 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SCARNA17.1-201 | ENST00000516211 | 143 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SCARNA17.2-201 | ENST00000516334 | 143 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SMIM18-201 | ENST00000517349 | 905 nt | APPRIS P1 TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC022695.3-201 | ENST00000523385 | 478 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AP002963.1-201 | ENST00000530590 | 184 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC009135.1-201 | ENST00000549303 | 776 nt | TSL 2 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC131274.4-201 | ENST00000577879 | 398 nt | TSL 3 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MIR4435-1-201 | ENST00000582552 | 80 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC068790.2-201 | ENST00000602601 | 557 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | Z84480.1-201 | ENST00000605131 | 311 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL589743.7-201 | ENST00000612637 | 233 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SCARNA17.4-201 | ENST00000614296 | 143 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC091834.1-201 | ENST00000614543 | 472 nt | BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | GPR171-203 | ENST00000617554 | 960 nt | APPRIS P1 BASIC | 2.29 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | MTND5P17-201 | ENST00000418405 | 1603 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | SERPINI2-202 | ENST00000461846 | 1514 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNU6-456P-201 | ENST00000384493 | 107 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | Y_RNA.576-201 | ENST00000384781 | 102 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | TRAV41-201 | ENST00000390468 | 336 nt | APPRIS P1 BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | FGFR1OP2P1-201 | ENST00000395943 | 500 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | RNA5SP508-201 | ENST00000411327 | 119 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL162254.1-202 | ENST00000419604 | 497 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC005019.2-201 | ENST00000434321 | 359 nt | TSL 5 BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL359636.3-201 | ENST00000439471 | 301 nt | TSL 2 BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AL161651.1-201 | ENST00000440882 | 223 nt | BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC099566.1-201 | ENST00000442558 | 479 nt | TSL 3 BASIC | 2.28 | □□□□□ -2.04 | | |
| ZIC1 | Q15915 | AC018693.1-201 | ENST00000442829 | 550 nt | TSL 4 BASIC | 2.28 | □□□□□ -2.04 | | |