Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 RNU6-715P-201ENST00000365204 103 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AL590002.1-201ENST00000406554 418 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 Y_RNA.623-201ENST00000411128 95 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDK3Q00526 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.76□□□□□ -1.97
CDK3Q00526 AL513043.1-201ENST00000439124 535 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC233279.1-201ENST00000455300 423 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK3Q00526 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK3Q00526 FAM92A1P2-202ENST00000504766 877 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC008716.1-201ENST00000511084 513 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 Y_RNA.693-201ENST00000516641 110 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 Y_RNA.704-201ENST00000516851 102 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK3Q00526 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC090136.1-201ENST00000520009 240 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 HIF1AP1-201ENST00000553642 175 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.76□□□□□ -1.97
CDK3Q00526 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.76□□□□□ -1.97
CDK3Q00526 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.76□□□□□ -1.97
CDK3Q00526 LINC00933-203ENST00000559812 219 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 HMGB1P33-201ENST00000563485 527 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK3Q00526 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK3Q00526 AC093788.1-201ENST00000609356 927 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC090115.4-201ENST00000609970 188 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC084782.3-201ENST00000612282 578 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 AC092593.1-201ENST00000515413 1815 ntBASIC2.76□□□□□ -1.97
CDK3Q00526 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDK3Q00526 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDK3Q00526 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDK3Q00526 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.75□□□□□ -1.97
CDK3Q00526 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.75□□□□□ -1.97
CDK3Q00526 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDK3Q00526 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDK3Q00526 RNU6-898P-201ENST00000365627 104 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 RNU6-45P-201ENST00000384471 107 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AL138827.1-201ENST00000402666 306 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 RPS15AP27-201ENST00000449183 343 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 RNU6-261P-201ENST00000459506 102 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC006483.1-201ENST00000487308 313 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 MTCO3P9-201ENST00000506989 781 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC104136.1-201ENST00000512969 394 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC006199.1-201ENST00000548728 219 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.75□□□□□ -1.97
CDK3Q00526 AL121821.2-201ENST00000556081 394 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC025678.1-201ENST00000567861 338 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.75□□□□□ -1.97
CDK3Q00526 AC073539.2-201ENST00000597113 165 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 BNIP3P30-201ENST00000601184 574 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 AL645944.1-201ENST00000603857 493 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK3Q00526 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 AL355596.1-201ENST00000565399 3996 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
CDK3Q00526 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDK3Q00526 AL354685.2-201ENST00000448218 1447 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC093536.2-201ENST00000565257 1406 ntBASIC2.75□□□□□ -1.97
CDK3Q00526 AC099654.7-201ENST00000635788 2127 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 SNORA69-201ENST00000383895 132 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 MIR181A1-201ENST00000385026 110 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 RNU6-750P-201ENST00000390946 107 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 SNORD37.1-201ENST00000390968 65 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 RNU6-192P-201ENST00000391253 100 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 MIR1289-1-201ENST00000408836 144 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 RNU6-193P-201ENST00000410977 107 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AF274854.1-201ENST00000413236 615 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AL451074.5-201ENST00000415894 435 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AL627311.1-201ENST00000431514 115 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.74□□□□□ -1.97
CDK3Q00526 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.74□□□□□ -1.97
CDK3Q00526 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.74□□□□□ -1.97
CDK3Q00526 AC093392.2-201ENST00000450682 337 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AC092001.1-201ENST00000453012 261 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AC091179.1-201ENST00000461606 579 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 HMGB1P30-201ENST00000492455 606 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
CDK3Q00526 MTND3P25-201ENST00000509243 135 ntBASIC2.74□□□□□ -1.97
CDK3Q00526 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms