Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL30P13-201ENST00000418873 348 ntBASIC1.44□□□□□ -2.18
TPM4P67936 MRPS36P1-201ENST00000421291 307 ntBASIC1.44□□□□□ -2.18
TPM4P67936 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM4P67936 MTCYBP42-201ENST00000444653 1130 ntBASIC1.44□□□□□ -2.18
TPM4P67936 ELOCP30-201ENST00000447108 299 ntBASIC1.44□□□□□ -2.18
TPM4P67936 PTP4A1P4-201ENST00000512479 322 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM4P67936 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.44□□□□□ -2.18
TPM4P67936 AC104072.1-201ENST00000568817 668 ntBASIC1.44□□□□□ -2.18
TPM4P67936 MIR3912-201ENST00000577566 105 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.44□□□□□ -2.18
TPM4P67936 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.6-201ENST00000603753 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.11-201ENST00000604059 253 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AC008162.1-201ENST00000604718 254 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.1-201ENST00000604752 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.2-201ENST00000604983 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.5-201ENST00000605253 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.4-201ENST00000605279 254 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.12-201ENST00000605291 253 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.8-201ENST00000605353 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL670379.7-201ENST00000605823 252 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AC098614.4-201ENST00000607601 462 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AL132822.1-201ENST00000617063 513 ntBASIC1.44□□□□□ -2.18
TPM4P67936 AC099654.9-201ENST00000637055 678 ntBASIC1.44□□□□□ -2.18
TPM4P67936 RBBP8P1-201ENST00000449447 1844 ntBASIC1.44□□□□□ -2.18
TPM4P67936 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TPM4P67936 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TPM4P67936 Y_RNA.408-201ENST00000383987 102 ntBASIC1.43□□□□□ -2.18
TPM4P67936 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TPM4P67936 BTF3L4P2-201ENST00000392798 346 ntBASIC1.43□□□□□ -2.18
TPM4P67936 RNU2-36P-201ENST00000410361 191 ntBASIC1.43□□□□□ -2.18
TPM4P67936 RNU2-41P-201ENST00000410991 178 ntBASIC1.43□□□□□ -2.18
TPM4P67936 RNU2-32P-201ENST00000411193 191 ntBASIC1.43□□□□□ -2.18
TPM4P67936 AL022400.1-201ENST00000423946 935 ntBASIC1.43□□□□□ -2.18
TPM4P67936 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 AL354941.1-201ENST00000438600 464 ntBASIC1.43□□□□□ -2.18
TPM4P67936 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
TPM4P67936 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
TPM4P67936 AC104629.1-201ENST00000494226 508 ntBASIC1.43□□□□□ -2.18
TPM4P67936 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM4P67936 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM4P67936 SUB1P3-201ENST00000564581 315 ntBASIC1.43□□□□□ -2.18
TPM4P67936 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.43□□□□□ -2.18
TPM4P67936 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM4P67936 RMST_6.1-201ENST00000611980 203 ntBASIC1.43□□□□□ -2.18
TPM4P67936 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TPM4P67936 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TPM4P67936 SNORD26-201ENST00000384147 75 ntBASIC1.42□□□□□ -2.18
TPM4P67936 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
TPM4P67936 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.42□□□□□ -2.18
TPM4P67936 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM4P67936 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.42□□□□□ -2.18
TPM4P67936 HMGB1P27-201ENST00000431429 603 ntBASIC1.42□□□□□ -2.18
TPM4P67936 HMGB3P12-201ENST00000438745 556 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.42□□□□□ -2.18
TPM4P67936 PTENP1-201ENST00000447117 1215 ntBASIC1.42□□□□□ -2.18
TPM4P67936 BTF3P15-201ENST00000455606 336 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC005908.1-201ENST00000468701 347 ntBASIC1.42□□□□□ -2.18
TPM4P67936 MTCYBP18-201ENST00000501056 747 ntBASIC1.42□□□□□ -2.18
TPM4P67936 RPF2P2-201ENST00000504693 896 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC024589.1-201ENST00000512207 263 ntBASIC1.42□□□□□ -2.18
TPM4P67936 RNU6-150P-201ENST00000516237 95 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC009902.1-201ENST00000519351 183 ntBASIC1.42□□□□□ -2.18
TPM4P67936 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC060771.1-201ENST00000582031 164 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC103987.3-201ENST00000582071 292 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AC073410.2-201ENST00000603240 332 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AL022345.1-201ENST00000607292 135 ntBASIC1.42□□□□□ -2.18
TPM4P67936 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.42□□□□□ -2.18
TPM4P67936 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TPM4P67936 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TPM4P67936 Y_RNA.67-201ENST00000362870 100 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AL590084.1-201ENST00000407885 387 ntBASIC1.41□□□□□ -2.18
TPM4P67936 RNA5SP100-201ENST00000410903 110 ntBASIC1.41□□□□□ -2.18
TPM4P67936 RNA5SP59-201ENST00000410922 110 ntBASIC1.41□□□□□ -2.18
TPM4P67936 SRIP3-201ENST00000413200 219 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM4P67936 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM4P67936 AL590365.1-201ENST00000450788 243 ntBASIC1.41□□□□□ -2.18
TPM4P67936 SNORD13-201ENST00000459299 104 ntBASIC1.41□□□□□ -2.18
TPM4P67936 RPL31P58-201ENST00000469001 379 ntBASIC1.41□□□□□ -2.18
TPM4P67936 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AC116337.1-201ENST00000509680 687 ntBASIC1.41□□□□□ -2.18
TPM4P67936 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.41□□□□□ -2.18
TPM4P67936 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.41□□□□□ -2.18
TPM4P67936 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TPM4P67936 RNU1-92P-201ENST00000517017 135 ntBASIC1.41□□□□□ -2.18
TPM4P67936 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.41□□□□□ -2.18
TPM4P67936 COPS8P3-201ENST00000526024 482 ntBASIC1.41□□□□□ -2.18
TPM4P67936 DEFB131D-201ENST00000526803 184 ntBASIC1.41□□□□□ -2.18
TPM4P67936 AP003392.2-201ENST00000527269 208 ntBASIC1.41□□□□□ -2.18
TPM4P67936 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.41□□□□□ -2.18
TPM4P67936 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms