Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC092447.10-201ENST00000620607 1652 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 RNU1-23P-201ENST00000363361 144 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 RNU6-1032P-201ENST00000384100 107 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 Y_RNA.578-201ENST00000390903 88 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 NDUFS5P1-201ENST00000405668 289 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.32□□□□□ -2.2
AP1S1P61966 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S1P61966 RPS15AP9-201ENST00000439856 381 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.32□□□□□ -2.2
AP1S1P61966 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.32□□□□□ -2.2
AP1S1P61966 HMGB1P35-201ENST00000503360 598 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
AP1S1P61966 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S1P61966 AC110760.3-202ENST00000515177 371 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 RN7SKP258-201ENST00000517151 304 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 RNU6-1028P-201ENST00000517164 93 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.32□□□□□ -2.2
AP1S1P61966 AC005832.3-201ENST00000537929 631 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
AP1S1P61966 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.32□□□□□ -2.2
AP1S1P61966 MTATP6P2-201ENST00000603319 678 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AL713866.2-201ENST00000603579 219 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AC016925.2-201ENST00000605108 242 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 NDUFA8P1-201ENST00000605525 367 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 uc_338.12-201ENST00000616344 181 ntBASIC1.32□□□□□ -2.2
AP1S1P61966 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S1P61966 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
AP1S1P61966 MTND5P10-201ENST00000603719 1809 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.31□□□□□ -2.2
AP1S1P61966 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
AP1S1P61966 AP000560.1-201ENST00000624150 1937 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
AP1S1P61966 RNU6-223P-201ENST00000362830 107 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 RNU2-63P-201ENST00000410792 194 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 USP9YP6-201ENST00000413550 854 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S1P61966 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S1P61966 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S1P61966 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S1P61966 GTF2IP3-201ENST00000433887 494 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AL161788.1-201ENST00000441805 169 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S1P61966 MEMO1P3-201ENST00000459811 302 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S1P61966 SNORA44.1-201ENST00000517031 108 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 RNU6-1183P-201ENST00000517054 60 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.31□□□□□ -2.2
AP1S1P61966 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S1P61966 AP003033.1-201ENST00000527244 415 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S1P61966 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S1P61966 MTND3P13-201ENST00000574391 343 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC091057.3-201ENST00000602684 733 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC103810.8-201ENST00000607347 118 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC009974.1-201ENST00000608881 455 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 MIR5739-201ENST00000619803 80 ntBASIC1.31□□□□□ -2.2
AP1S1P61966 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S1P61966 SNORA25B-201ENST00000365507 128 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 MIR518A2-201ENST00000384966 87 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 MIR95-201ENST00000385072 81 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 FGF7P8-201ENST00000402994 292 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AC004965.1-201ENST00000413033 213 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 RPS24P7-201ENST00000416921 246 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.3□□□□□ -2.2
AP1S1P61966 AL953862.1-201ENST00000423016 168 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AC104563.1-201ENST00000476147 376 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AL163540.1-201ENST00000485382 386 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.3□□□□□ -2.2
AP1S1P61966 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S1P61966 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.3□□□□□ -2.2
AP1S1P61966 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S1P61966 AC021755.4-201ENST00000616620 456 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AL353770.2-201ENST00000620024 78 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 AC097655.1-201ENST00000635075 318 ntBASIC1.3□□□□□ -2.2
AP1S1P61966 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S1P61966 RNU1-62P-201ENST00000362599 164 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 SNORA63.3-201ENST00000362682 132 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 RNU6-853P-201ENST00000364306 107 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 RNU6-224P-201ENST00000384055 107 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 RNU6-14P-201ENST00000384630 106 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 SNORA40.19-201ENST00000390846 128 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 AL359634.1-202ENST00000404721 284 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 Y_RNA.595-201ENST00000410403 105 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 AC078974.1-201ENST00000411597 223 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 MTND4P3-201ENST00000417829 541 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.29□□□□□ -2.2
AP1S1P61966 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.29□□□□□ -2.2
AP1S1P61966 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.29□□□□□ -2.2
AP1S1P61966 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.29□□□□□ -2.2
AP1S1P61966 AC024589.1-201ENST00000512207 263 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 SNORA31.3-201ENST00000516029 96 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 ACA59.2-201ENST00000517061 156 ntBASIC1.29□□□□□ -2.2
AP1S1P61966 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
AP1S1P61966 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.29□□□□□ -2.2
AP1S1P61966 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms