Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HMGB1P27-201ENST00000431429 603 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.14□□□□□ -2.23
AP3S2P59780 MTND2P3-201ENST00000452458 470 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AL049873.1-201ENST00000480540 376 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.14□□□□□ -2.23
AP3S2P59780 SNORA25.15-201ENST00000516487 89 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AC022616.8-201ENST00000533569 253 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.14□□□□□ -2.23
AP3S2P59780 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.14□□□□□ -2.23
AP3S2P59780 AC079148.1-201ENST00000565944 819 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AL121890.5-201ENST00000620848 304 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 AC090517.3-201ENST00000625170 141 ntBASIC1.14□□□□□ -2.23
AP3S2P59780 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
AP3S2P59780 AL079343.1-201ENST00000572358 1771 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
AP3S2P59780 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.13□□□□□ -2.23
AP3S2P59780 RNU6-271P-201ENST00000363858 105 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 RNU6-1274P-201ENST00000384557 107 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 AC138623.1-201ENST00000418060 216 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.13□□□□□ -2.23
AP3S2P59780 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.13□□□□□ -2.23
AP3S2P59780 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AL158053.1-201ENST00000441503 453 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.13□□□□□ -2.23
AP3S2P59780 AC069306.1-201ENST00000507006 843 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AC117532.1-201ENST00000514638 323 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 RNVU1-2-201ENST00000516326 135 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.13□□□□□ -2.23
AP3S2P59780 LINC00557-201ENST00000563184 1279 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 MIR4435-1-201ENST00000582552 80 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AC004908.3-201ENST00000610248 625 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 AC091834.1-201ENST00000614543 472 ntBASIC1.13□□□□□ -2.23
AP3S2P59780 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
AP3S2P59780 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
AP3S2P59780 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
AP3S2P59780 RNU6-1010P-201ENST00000362757 107 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 MIR186-201ENST00000384988 86 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.12□□□□□ -2.23
AP3S2P59780 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC1.12□□□□□ -2.23
AP3S2P59780 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.12□□□□□ -2.23
AP3S2P59780 RPS26P55-201ENST00000471178 356 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.12□□□□□ -2.23
AP3S2P59780 AC008549.1-201ENST00000512900 643 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 SNORA31.3-201ENST00000516029 96 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 SNORA31.17-201ENST00000516953 127 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.12□□□□□ -2.23
AP3S2P59780 MIR5708-201ENST00000579723 85 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 SCARNA15.3-201ENST00000626315 122 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 SCARNA4.1-201ENST00000628597 123 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 AC099654.9-201ENST00000637055 678 ntBASIC1.12□□□□□ -2.23
AP3S2P59780 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.12□□□□□ -2.23
AP3S2P59780 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
AP3S2P59780 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
AP3S2P59780 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.11□□□□□ -2.23
AP3S2P59780 RNU4-82P-201ENST00000362443 140 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 Y_RNA.99-201ENST00000363138 105 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 RNU6-354P-201ENST00000383862 107 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 RNU6-610P-201ENST00000384264 107 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 MIR504-201ENST00000385065 83 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AL035407.1-201ENST00000429211 571 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.11□□□□□ -2.23
AP3S2P59780 MTND5P14-201ENST00000441481 1267 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 RPL7P36-201ENST00000444633 681 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.11□□□□□ -2.23
AP3S2P59780 RPL18AP17-201ENST00000455326 198 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC104629.1-201ENST00000494226 508 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.11□□□□□ -2.23
AP3S2P59780 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
AP3S2P59780 MIR4648-201ENST00000580107 72 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC098483.2-201ENST00000603158 454 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.11□□□□□ -2.23
AP3S2P59780 AC093788.1-201ENST00000609356 927 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 Z82243.1-201ENST00000609432 473 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC090970.3-201ENST00000612566 866 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 AC097655.1-201ENST00000635075 318 ntBASIC1.11□□□□□ -2.23
AP3S2P59780 HAUS6P2-201ENST00000433254 2404 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
AP3S2P59780 MTCO1P56-201ENST00000401674 224 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL359634.1-202ENST00000404721 284 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.1□□□□□ -2.23
AP3S2P59780 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.1□□□□□ -2.23
AP3S2P59780 AL035666.1-201ENST00000446195 348 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 ELOCP30-201ENST00000447108 299 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 MTND1P31-201ENST00000449206 961 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.1□□□□□ -2.23
AP3S2P59780 DUXAP8-207ENST00000456786 622 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 RPL30P7-201ENST00000479312 323 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.1□□□□□ -2.23
AP3S2P59780 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.1□□□□□ -2.23
AP3S2P59780 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms