Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SRGNP1-201ENST00000603392 451 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC087588.2-201ENST00000617667 426 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AL713922.2-201ENST00000619384 716 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 MIR6500-201ENST00000622700 86 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC027309.3-201ENST00000623419 351 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC090617.7-201ENST00000623952 126 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.47□□□□□ -1.85
CLRN1P58418 AL606534.2-204ENST00000635008 178 ntBASIC3.47□□□□□ -1.85
CLRN1P58418 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.47□□□□□ -1.85
CLRN1P58418 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLRN1P58418 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CLRN1P58418 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.46□□□□□ -1.85
CLRN1P58418 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLRN1P58418 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLRN1P58418 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CLRN1P58418 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.46□□□□□ -1.86
CLRN1P58418 Y_RNA.126-201ENST00000363382 111 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RN7SKP280-201ENST00000364196 304 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 Z98749.2-208ENST00000381646 500 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 Y_RNA.389-201ENST00000383924 113 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 Y_RNA.577-201ENST00000384794 101 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CLRN1P58418 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLRN1P58418 AL138885.1-201ENST00000405921 675 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNA5SP317-201ENST00000410176 116 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNA5SP311-201ENST00000411290 116 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MTND3P9-201ENST00000429526 346 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.46□□□□□ -1.86
CLRN1P58418 RPL21P104-201ENST00000464143 478 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 FTH1P2-201ENST00000466086 412 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 AC108043.1-201ENST00000512696 574 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MTCO2P24-201ENST00000515611 426 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNA5SP315-201ENST00000516340 116 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNU6-612P-201ENST00000516909 102 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNU6-1183P-201ENST00000517054 60 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RNA5SP312-201ENST00000517068 116 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MIR2116-201ENST00000517221 80 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.46□□□□□ -1.86
CLRN1P58418 AC113195.1-201ENST00000579952 141 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MIR4503-201ENST00000582187 83 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MIR4697-201ENST00000582977 78 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 MIR8076-201ENST00000611401 83 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 HMGB1P24-202ENST00000615653 685 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.46□□□□□ -1.86
CLRN1P58418 U2.21-201ENST00000637295 81 ntBASIC3.46□□□□□ -1.86
CLRN1P58418 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.46□□□□□ -1.86
CLRN1P58418 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLRN1P58418 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.45□□□□□ -1.86
CLRN1P58418 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLRN1P58418 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.45□□□□□ -1.86
CLRN1P58418 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLRN1P58418 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLRN1P58418 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CLRN1P58418 Y_RNA.153-201ENST00000363615 91 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 RNU6-450P-201ENST00000364654 107 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 RNU6-628P-201ENST00000410675 107 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
CLRN1P58418 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.45□□□□□ -1.86
CLRN1P58418 AC092017.2-201ENST00000427600 362 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 HMGB1P12-201ENST00000438594 598 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.45□□□□□ -1.86
CLRN1P58418 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.45□□□□□ -1.86
CLRN1P58418 RN7SL385P-201ENST00000468873 276 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.45□□□□□ -1.86
CLRN1P58418 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.45□□□□□ -1.86
CLRN1P58418 RNU6-475P-201ENST00000516073 104 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AP000889.1-201ENST00000530968 660 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 TOMM20P2-201ENST00000540082 421 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AC005476.1-201ENST00000554427 397 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 HSBP1P1-201ENST00000555205 166 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 PARP1P2-201ENST00000556806 195 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AL355598.1-201ENST00000604169 202 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AL590392.1-201ENST00000604960 446 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AC005046.1-201ENST00000608515 625 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AL110115.1-201ENST00000614396 364 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 AC083809.1-201ENST00000615051 472 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLRN1P58418 SCARNA4-202ENST00000625402 129 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.45□□□□□ -1.86
CLRN1P58418 U4.7-201ENST00000638126 106 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
CLRN1P58418 AC093908.1-201ENST00000623125 8092 ntBASIC3.45□□□□□ -1.86
CLRN1P58418 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
CLRN1P58418 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.44□□□□□ -1.86
CLRN1P58418 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CLRN1P58418 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLRN1P58418 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CLRN1P58418 RNU6-78P-201ENST00000362897 107 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RNU6-778P-201ENST00000363269 103 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 U3.6-201ENST00000363622 211 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RNY3P11-201ENST00000364153 102 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RNU6-26P-201ENST00000383985 107 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RNU1-13P-201ENST00000384499 162 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms