Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.83□□□□□ -1.8
GFRA1P56159 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA1P56159 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA1P56159 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RNU6-874P-201ENST00000362390 105 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 SNORD56.1-201ENST00000362913 68 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RNU6-270P-201ENST00000364131 105 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RNA5SP515-201ENST00000364570 118 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RPS26P8-201ENST00000393490 348 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.83□□□□□ -1.8
GFRA1P56159 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 RBMY1KP-201ENST00000423480 476 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC004975.1-201ENST00000428733 208 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 USP9YP16-201ENST00000430287 407 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC243964.1-201ENST00000441814 261 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AL590664.1-201ENST00000448065 339 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 ABCF2P2-201ENST00000450549 296 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC012308.1-201ENST00000451232 178 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 USP9YP23-201ENST00000455085 407 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RNU7-87P-201ENST00000459343 62 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RN7SL817P-201ENST00000480777 288 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RPL30P14-201ENST00000482744 348 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 MRPL42P6-201ENST00000486397 371 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RPS29P20-201ENST00000489592 171 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.83□□□□□ -1.8
GFRA1P56159 SNORA25.11-201ENST00000515935 105 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 RNU6-1143P-201ENST00000516125 104 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.83□□□□□ -1.8
GFRA1P56159 AL391261.3-201ENST00000557194 520 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC006557.5-201ENST00000603126 811 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC019159.1-201ENST00000605094 187 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC090425.1-201ENST00000610007 140 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AC064801.1-201ENST00000612025 407 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 AL138721.1-201ENST00000616756 179 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 MIR8062-201ENST00000621515 85 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 MIR492-201ENST00000638676 116 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.83□□□□□ -1.8
GFRA1P56159 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.83□□□□□ -1.8
GFRA1P56159 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 AC110491.1-201ENST00000562191 2010 ntBASIC3.83□□□□□ -1.8
GFRA1P56159 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA1P56159 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
GFRA1P56159 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.83□□□□□ -1.8
GFRA1P56159 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.83□□□□□ -1.8
GFRA1P56159 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
GFRA1P56159 RNU1-76P-201ENST00000362903 159 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
GFRA1P56159 Y_RNA.471-201ENST00000384312 102 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 Y_RNA.476-201ENST00000384347 108 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 FTH1P15-201ENST00000406984 280 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 RPL23AP82-202ENST00000427528 469 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 COX6B1P7-201ENST00000430845 235 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.82□□□□□ -1.8
GFRA1P56159 HMGN2P10-201ENST00000448085 265 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.82□□□□□ -1.8
GFRA1P56159 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.82□□□□□ -1.8
GFRA1P56159 snoU13.30-201ENST00000458951 104 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 RN7SL41P-201ENST00000476144 297 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.82□□□□□ -1.8
GFRA1P56159 AC074250.1-201ENST00000511117 192 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 IGHV3-76-201ENST00000522465 295 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 RAC1P9-201ENST00000604990 392 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 AC023043.4-201ENST00000612081 449 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 SNX18P1Y-201ENST00000616231 511 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
GFRA1P56159 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.82□□□□□ -1.8
GFRA1P56159 AC068254.2-201ENST00000623938 3577 ntBASIC3.82□□□□□ -1.8
GFRA1P56159 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
GFRA1P56159 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GFRA1P56159 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GFRA1P56159 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.81□□□□□ -1.8
GFRA1P56159 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
GFRA1P56159 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
GFRA1P56159 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
GFRA1P56159 Y_RNA.358-201ENST00000365491 99 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 RNU6-1222P-201ENST00000384615 107 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
GFRA1P56159 AL356968.1-201ENST00000416622 474 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC074117.2-201ENST00000417130 397 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms