Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SUMO3P55854 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SUMO3P55854 Y_RNA.11-201ENST00000362375 109 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 RNU1-105P-201ENST00000363470 161 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 U8.11-201ENST00000384699 133 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 U8.12-201ENST00000384701 133 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
SUMO3P55854 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SUMO3P55854 AL030996.1-201ENST00000411430 235 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 CYCSP19-201ENST00000411715 316 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 ATP5A1P2-201ENST00000412323 255 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC096649.2-201ENST00000416186 393 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.32□□□□□ -1.88
SUMO3P55854 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.32□□□□□ -1.88
SUMO3P55854 AL161651.1-201ENST00000440882 223 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SUMO3P55854 RPS3AP46-201ENST00000448352 682 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AL136097.1-201ENST00000456945 913 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.32□□□□□ -1.88
SUMO3P55854 U8.18-201ENST00000459285 133 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 MTND4P17-201ENST00000470444 350 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
SUMO3P55854 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.32□□□□□ -1.88
SUMO3P55854 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.32□□□□□ -1.88
SUMO3P55854 AC008011.1-201ENST00000545989 227 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.32□□□□□ -1.88
SUMO3P55854 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.32□□□□□ -1.88
SUMO3P55854 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.32□□□□□ -1.88
SUMO3P55854 AC020895.1-201ENST00000595362 272 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC016727.1-205ENST00000605437 569 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 AC008669.1-201ENST00000565823 2178 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 AC004944.1-201ENST00000517807 3059 ntBASIC3.32□□□□□ -1.88
SUMO3P55854 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SUMO3P55854 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.31□□□□□ -1.88
SUMO3P55854 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SUMO3P55854 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SUMO3P55854 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SUMO3P55854 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.31□□□□□ -1.88
SUMO3P55854 RNU4-79P-201ENST00000362764 141 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 RNU6-750P-201ENST00000390946 107 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 RPS29P13-201ENST00000402041 169 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 FTH1P15-201ENST00000406984 280 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 RN7SKP202-201ENST00000410439 330 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.31□□□□□ -1.88
SUMO3P55854 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.31□□□□□ -1.88
SUMO3P55854 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.31□□□□□ -1.88
SUMO3P55854 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 MRPL42P6-201ENST00000486397 371 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AC116337.1-201ENST00000509680 687 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 RNU1-54P-201ENST00000517181 120 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SUMO3P55854 AC010186.2-204ENST00000537668 439 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AC093027.1-201ENST00000546698 429 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 TRAV32-201ENST00000553993 340 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 VN1R107P-201ENST00000601784 209 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
SUMO3P55854 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 MIR6128-201ENST00000615528 109 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
SUMO3P55854 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SUMO3P55854 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SUMO3P55854 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SUMO3P55854 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.3□□□□□ -1.88
SUMO3P55854 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SUMO3P55854 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SUMO3P55854 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SUMO3P55854 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SUMO3P55854 RNU2-49P-201ENST00000410666 184 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AK3P2-201ENST00000507976 429 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.3□□□□□ -1.88
SUMO3P55854 AC005476.1-201ENST00000554427 397 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 DNAJC8P1-201ENST00000554535 372 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC103996.1-201ENST00000555468 102 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC010653.1-201ENST00000571108 881 ntBASIC3.3□□□□□ -1.88
SUMO3P55854 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms