Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 MTND4P2-201ENST00000507767 1203 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.07□□□□□ -2.08
PKNOX1P55347 FABP5P5-201ENST00000515537 406 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AP005902.1-201ENST00000521358 186 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.07□□□□□ -2.08
PKNOX1P55347 RPL21P5-201ENST00000554662 472 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 LINC00933-203ENST00000559812 219 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 Z99289.3-201ENST00000605586 594 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC069294.1-201ENST00000608397 350 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC091304.9-201ENST00000612091 226 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC024581.2-201ENST00000619986 252 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.07□□□□□ -2.08
PKNOX1P55347 AF246928.1-201ENST00000623768 87 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 AP003400.5-201ENST00000624827 617 ntBASIC2.07□□□□□ -2.08
PKNOX1P55347 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PKNOX1P55347 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PKNOX1P55347 Y_RNA.33-201ENST00000362591 102 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 RNU6-486P-201ENST00000363116 107 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 RNU6-1280P-201ENST00000365211 107 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 RNU6-748P-201ENST00000384648 107 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 MRPL42P2-201ENST00000403169 426 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC114491.1-201ENST00000416095 246 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX1P55347 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 MTND5P25-201ENST00000430499 799 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 USP9YP15-201ENST00000442391 422 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AL133217.1-201ENST00000450980 425 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 ART2BP-201ENST00000453501 499 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AC011005.2-201ENST00000487324 359 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 Y_RNA.672-201ENST00000516289 104 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 MIR892C-201ENST00000516410 77 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 MIR514B-201ENST00000516774 80 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 RNU6-1220P-201ENST00000517126 108 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 LRRC34P1-201ENST00000542742 915 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AC009977.1-201ENST00000586015 570 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AL022154.1-201ENST00000604698 785 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AC122133.1-201ENST00000613964 233 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX1P55347 AC010378.1-201ENST00000619270 362 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX1P55347 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX1P55347 MTND4P1-201ENST00000457501 1466 ntBASIC2.06□□□□□ -2.08
PKNOX1P55347 AC103710.2-202ENST00000641454 2853 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AC073343.1-201ENST00000328239 651 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 Y_RNA.22-201ENST00000362492 102 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 RNA5SP125-201ENST00000364843 120 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 RPL23AP32-201ENST00000395315 459 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 NDUFB4P4-201ENST00000404822 243 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 CIR1P3-201ENST00000405137 479 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AL031779.1-201ENST00000415663 330 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC003685.2-201ENST00000422795 395 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 BX276092.3-201ENST00000424182 230 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AC137499.1-201ENST00000427602 88 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 SRIP2-201ENST00000428470 166 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.05□□□□□ -2.08
PKNOX1P55347 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 KLF3P2-201ENST00000465138 268 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC022493.1-201ENST00000492984 337 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 SNORA25.11-201ENST00000515935 105 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 Y_RNA.717-201ENST00000517106 92 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC022616.3-201ENST00000523940 148 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AL160281.1-201ENST00000605307 311 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AC126118.1-201ENST00000607744 628 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC138627.2-201ENST00000624202 601 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 MTND4P4-201ENST00000439033 1366 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX1P55347 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX1P55347 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX1P55347 AC006020.1-201ENST00000420179 1854 ntBASIC2.05□□□□□ -2.08
PKNOX1P55347 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX1P55347 SNORD3E-201ENST00000362899 217 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms