Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 Y_RNA.399-201ENST00000383955 105 ntBASIC2.73□□□□□ -1.97
CDH11P55287 SNORD15B-201ENST00000384714 146 ntBASIC2.73□□□□□ -1.97
CDH11P55287 RNA5SP252-201ENST00000391131 119 ntBASIC2.73□□□□□ -1.97
CDH11P55287 RNU1-101P-201ENST00000391171 127 ntBASIC2.73□□□□□ -1.97
CDH11P55287 U3.26-201ENST00000391236 204 ntBASIC2.73□□□□□ -1.97
CDH11P55287 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH11P55287 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH11P55287 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH11P55287 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH11P55287 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 BRK1P2-201ENST00000442875 223 ntBASIC2.73□□□□□ -1.97
CDH11P55287 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.73□□□□□ -1.97
CDH11P55287 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 HMGN2P13-201ENST00000476476 274 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC091885.1-201ENST00000506658 268 ntBASIC2.73□□□□□ -1.97
CDH11P55287 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
CDH11P55287 AC104136.1-201ENST00000512969 394 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC112206.3-201ENST00000514578 389 ntBASIC2.73□□□□□ -1.97
CDH11P55287 RN7SKP272-201ENST00000516988 232 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC025755.1-201ENST00000521306 278 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH11P55287 AL391261.3-201ENST00000557194 520 ntBASIC2.73□□□□□ -1.97
CDH11P55287 H3F3AP1-201ENST00000559984 334 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 MIR548AC-201ENST00000585049 88 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH11P55287 RNU6-89P-201ENST00000606519 100 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AL020991.1-201ENST00000612314 373 ntBASIC2.73□□□□□ -1.97
CDH11P55287 uc_338.34-201ENST00000617467 174 ntBASIC2.73□□□□□ -1.97
CDH11P55287 AC090617.7-201ENST00000623952 126 ntBASIC2.73□□□□□ -1.97
CDH11P55287 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH11P55287 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH11P55287 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
CDH11P55287 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH11P55287 OR4G1P-203ENST00000641984 1631 ntBASIC2.72□□□□□ -1.97
CDH11P55287 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH11P55287 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CDH11P55287 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDH11P55287 Y_RNA.33-201ENST00000362591 102 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU6-522P-201ENST00000364497 107 ntBASIC2.72□□□□□ -1.97
CDH11P55287 U3.12-201ENST00000364498 214 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU6-395P-201ENST00000365662 106 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU6-877P-201ENST00000383868 107 ntBASIC2.72□□□□□ -1.97
CDH11P55287 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CDH11P55287 SNORD67-201ENST00000390833 111 ntBASIC2.72□□□□□ -1.97
CDH11P55287 SNORA40C-201ENST00000391285 128 ntBASIC2.72□□□□□ -1.97
CDH11P55287 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CDH11P55287 FGF7P8-201ENST00000402994 292 ntBASIC2.72□□□□□ -1.97
CDH11P55287 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.72□□□□□ -1.97
CDH11P55287 AL606923.1-201ENST00000406616 190 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU2-3P-201ENST00000410144 191 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU6-1025P-201ENST00000410629 104 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RPL30P16-201ENST00000419341 429 ntBASIC2.72□□□□□ -1.97
CDH11P55287 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH11P55287 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH11P55287 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH11P55287 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH11P55287 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH11P55287 LRRC34P2-201ENST00000514850 553 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU2-69P-201ENST00000516061 100 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU1-103P-201ENST00000516502 125 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RNU6-358P-201ENST00000516564 75 ntBASIC2.72□□□□□ -1.97
CDH11P55287 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH11P55287 AP000867.2-201ENST00000532468 320 ntBASIC2.72□□□□□ -1.97
CDH11P55287 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH11P55287 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.72□□□□□ -1.97
CDH11P55287 UBL5P2-201ENST00000583788 219 ntBASIC2.72□□□□□ -1.97
CDH11P55287 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH11P55287 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.72□□□□□ -1.97
CDH11P55287 AP003400.5-201ENST00000624827 617 ntBASIC2.72□□□□□ -1.97
CDH11P55287 MIR3662-201ENST00000637030 95 ntBASIC2.72□□□□□ -1.97
CDH11P55287 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.72□□□□□ -1.97
CDH11P55287 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.71□□□□□ -1.97
CDH11P55287 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CDH11P55287 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CDH11P55287 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.71□□□□□ -1.98
CDH11P55287 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDH11P55287 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
CDH11P55287 SNORD3E-201ENST00000362899 217 ntBASIC2.71□□□□□ -1.98
CDH11P55287 RNU6-884P-201ENST00000363889 107 ntBASIC2.71□□□□□ -1.98
CDH11P55287 Y_RNA.231-201ENST00000364358 102 ntBASIC2.71□□□□□ -1.98
CDH11P55287 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
CDH11P55287 Z98749.2-208ENST00000381646 500 ntBASIC2.71□□□□□ -1.98
CDH11P55287 Y_RNA.390-201ENST00000383932 102 ntBASIC2.71□□□□□ -1.98
CDH11P55287 SNORA7.4-201ENST00000384249 137 ntBASIC2.71□□□□□ -1.98
CDH11P55287 RNU6-166P-201ENST00000384371 107 ntBASIC2.71□□□□□ -1.98
CDH11P55287 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CDH11P55287 SNORD70.1-201ENST00000391007 85 ntBASIC2.71□□□□□ -1.98
CDH11P55287 RPL21P90-201ENST00000415692 466 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
CDH11P55287 AL353621.1-201ENST00000418219 243 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms