Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL160275.3-201ENST00000423876 471 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AL022400.1-201ENST00000423946 935 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH6P55285 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH6P55285 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH6P55285 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH6P55285 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH6P55285 AC107032.1-201ENST00000485945 480 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.96□□□□□ -2.1
CDH6P55285 RNU6-677P-201ENST00000516914 101 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.96□□□□□ -2.1
CDH6P55285 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.96□□□□□ -2.1
CDH6P55285 RANP3-201ENST00000530970 276 ntBASIC1.96□□□□□ -2.1
CDH6P55285 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH6P55285 MTND1P8-201ENST00000571424 950 ntBASIC1.96□□□□□ -2.1
CDH6P55285 MIR4529-201ENST00000578110 78 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.96□□□□□ -2.1
CDH6P55285 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH6P55285 AL031281.1-201ENST00000604049 488 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC013244.3-201ENST00000605614 388 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC108747.1-201ENST00000609508 535 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC021755.4-201ENST00000616620 456 ntBASIC1.96□□□□□ -2.1
CDH6P55285 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDH6P55285 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.96□□□□□ -2.1
CDH6P55285 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH6P55285 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH6P55285 SNORD114-1-201ENST00000362705 72 ntBASIC1.95□□□□□ -2.1
CDH6P55285 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
CDH6P55285 MIR513B-201ENST00000385136 84 ntBASIC1.95□□□□□ -2.1
CDH6P55285 SNORA40C-201ENST00000391285 128 ntBASIC1.95□□□□□ -2.1
CDH6P55285 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
CDH6P55285 GSTA9P-201ENST00000406231 611 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC127391.1-201ENST00000411737 98 ntBASIC1.95□□□□□ -2.1
CDH6P55285 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH6P55285 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH6P55285 AL591212.2-201ENST00000433923 257 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH6P55285 HMGB3P12-201ENST00000438745 556 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC003071.1-201ENST00000451219 789 ntBASIC1.95□□□□□ -2.1
CDH6P55285 FABP5P13-201ENST00000452144 328 ntBASIC1.95□□□□□ -2.1
CDH6P55285 MTCO1P42-201ENST00000457379 726 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC140059.1-201ENST00000489238 361 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH6P55285 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH6P55285 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH6P55285 RNU6-1315P-201ENST00000517187 99 ntBASIC1.95□□□□□ -2.1
CDH6P55285 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.95□□□□□ -2.1
CDH6P55285 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.95□□□□□ -2.1
CDH6P55285 OR11H5P-201ENST00000554039 926 ntBASIC1.95□□□□□ -2.1
CDH6P55285 PSMA3P-201ENST00000555485 635 ntBASIC1.95□□□□□ -2.1
CDH6P55285 MIR3945-201ENST00000581853 98 ntBASIC1.95□□□□□ -2.1
CDH6P55285 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.95□□□□□ -2.1
CDH6P55285 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC105148.1-201ENST00000604961 409 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AL391813.2-201ENST00000609113 322 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
CDH6P55285 AC087241.4-201ENST00000612441 480 ntBASIC1.95□□□□□ -2.1
CDH6P55285 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CDH6P55285 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDH6P55285 SMIM11P1-201ENST00000369586 178 ntBASIC1.94□□□□□ -2.1
CDH6P55285 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
CDH6P55285 FCF1P10-201ENST00000407590 479 ntBASIC1.94□□□□□ -2.1
CDH6P55285 RNU2-36P-201ENST00000410361 191 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL008987.1-201ENST00000415528 237 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH6P55285 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AIMP1P2-201ENST00000425294 312 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 MTND1P20-201ENST00000430341 950 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH6P55285 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.94□□□□□ -2.1
CDH6P55285 AC117522.2-201ENST00000510049 657 ntBASIC1.94□□□□□ -2.1
CDH6P55285 RNU6-678P-201ENST00000516832 109 ntBASIC1.94□□□□□ -2.1
CDH6P55285 RNA5SP137-201ENST00000516833 135 ntBASIC1.94□□□□□ -2.1
CDH6P55285 SNORA48.11-201ENST00000517015 89 ntBASIC1.94□□□□□ -2.1
CDH6P55285 RNU6-1003P-201ENST00000517099 105 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 ARL2BPP2-201ENST00000550907 489 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDH6P55285 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 MIR3908-201ENST00000579798 126 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH6P55285 AC174048.1-201ENST00000603389 144 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC087045.1-201ENST00000605856 382 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC022893.3-201ENST00000607665 437 ntBASIC1.94□□□□□ -2.1
CDH6P55285 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL078595.3-201ENST00000623815 1166 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AC017037.3-201ENST00000625016 472 ntBASIC1.94□□□□□ -2.1
CDH6P55285 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.94□□□□□ -2.1
CDH6P55285 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH6P55285 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.94□□□□□ -2.1
CDH6P55285 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
CDH6P55285 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.93□□□□□ -2.1
CDH6P55285 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDH6P55285 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.93□□□□□ -2.1
CDH6P55285 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms