Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AL135752.1-201ENST00000479477 471 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.24□□□□□ -1.89
PMS2P54278 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
PMS2P54278 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.24□□□□□ -1.89
PMS2P54278 MTND4P7-201ENST00000523876 130 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AC012409.4-201ENST00000612923 249 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AC034102.8-201ENST00000615146 484 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AC009248.2-201ENST00000619826 254 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AL589994.2-201ENST00000621124 579 ntBASIC3.24□□□□□ -1.89
PMS2P54278 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.24□□□□□ -1.89
PMS2P54278 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PMS2P54278 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
PMS2P54278 MTND4P14-201ENST00000435799 1354 ntBASIC3.24□□□□□ -1.89
PMS2P54278 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PMS2P54278 AC121333.1-201ENST00000567488 2709 ntBASIC3.23□□□□□ -1.89
PMS2P54278 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.23□□□□□ -1.89
PMS2P54278 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
PMS2P54278 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PMS2P54278 RNU6-1287P-201ENST00000362914 107 ntBASIC3.23□□□□□ -1.89
PMS2P54278 Y_RNA.167-201ENST00000363735 109 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RNU4-76P-201ENST00000364509 141 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RNU4-66P-201ENST00000365199 138 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RNU6-1035P-201ENST00000384477 107 ntBASIC3.23□□□□□ -1.89
PMS2P54278 Y_RNA.509-201ENST00000384506 99 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RNU6-1060P-201ENST00000384664 107 ntBASIC3.23□□□□□ -1.89
PMS2P54278 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PMS2P54278 SNORD37.1-201ENST00000390968 65 ntBASIC3.23□□□□□ -1.89
PMS2P54278 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PMS2P54278 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RNU4-26P-201ENST00000410270 107 ntBASIC3.23□□□□□ -1.89
PMS2P54278 Y_RNA.615-201ENST00000410769 117 ntBASIC3.23□□□□□ -1.89
PMS2P54278 BX323014.1-201ENST00000412876 237 ntBASIC3.23□□□□□ -1.89
PMS2P54278 RPL35AP12-201ENST00000425362 338 ntBASIC3.23□□□□□ -1.89
PMS2P54278 IFNA20P-201ENST00000436840 528 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.23□□□□□ -1.89
PMS2P54278 RPL7P12-201ENST00000446719 750 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AL590639.1-201ENST00000456484 337 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC007547.1-201ENST00000462177 490 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
PMS2P54278 RBBP4P6-201ENST00000508098 202 ntBASIC3.23□□□□□ -1.89
PMS2P54278 FAM206BP-201ENST00000510179 541 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC112206.3-201ENST00000514578 389 ntBASIC3.23□□□□□ -1.89
PMS2P54278 Y_RNA.665-201ENST00000516177 98 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC087241.2-201ENST00000535801 324 ntBASIC3.23□□□□□ -1.89
PMS2P54278 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.23□□□□□ -1.89
PMS2P54278 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.23□□□□□ -1.89
PMS2P54278 RPS3AP23-202ENST00000574601 686 ntBASIC3.23□□□□□ -1.89
PMS2P54278 MIR4325-201ENST00000583049 90 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.23□□□□□ -1.89
PMS2P54278 AC007619.2-201ENST00000605743 379 ntBASIC3.23□□□□□ -1.89
PMS2P54278 AC135507.2-201ENST00000612443 309 ntBASIC3.23□□□□□ -1.89
PMS2P54278 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
PMS2P54278 uc_338.34-201ENST00000617467 174 ntBASIC3.23□□□□□ -1.89
PMS2P54278 MTND5P42-201ENST00000637720 498 ntBASIC3.23□□□□□ -1.89
PMS2P54278 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PMS2P54278 AC233263.6-201ENST00000631132 1963 ntBASIC3.23□□□□□ -1.89
PMS2P54278 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PMS2P54278 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PMS2P54278 UBE2V1P2-201ENST00000397758 440 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AL592114.1-201ENST00000403842 483 ntBASIC3.22□□□□□ -1.89
PMS2P54278 EEF1A1P40-201ENST00000412883 573 ntBASIC3.22□□□□□ -1.89
PMS2P54278 MTND3P8-201ENST00000412909 339 ntBASIC3.22□□□□□ -1.89
PMS2P54278 RPL7P10-201ENST00000417407 739 ntBASIC3.22□□□□□ -1.89
PMS2P54278 BTF3L4P3-201ENST00000418879 476 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.22□□□□□ -1.89
PMS2P54278 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.22□□□□□ -1.89
PMS2P54278 RNU6-1208P-201ENST00000459588 107 ntBASIC3.22□□□□□ -1.89
PMS2P54278 RNU6-329P-201ENST00000459618 107 ntBASIC3.22□□□□□ -1.89
PMS2P54278 RPL21P13-201ENST00000488305 481 ntBASIC3.22□□□□□ -1.89
PMS2P54278 CCDC34P1-201ENST00000507441 517 ntBASIC3.22□□□□□ -1.89
PMS2P54278 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.22□□□□□ -1.89
PMS2P54278 RNA5SP290-201ENST00000517133 127 ntBASIC3.22□□□□□ -1.89
PMS2P54278 RN7SKP256-201ENST00000517201 314 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.22□□□□□ -1.89
PMS2P54278 AC107953.1-201ENST00000522216 297 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.22□□□□□ -1.89
PMS2P54278 RANP3-201ENST00000530970 276 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.22□□□□□ -1.89
PMS2P54278 AC243972.3-201ENST00000539655 198 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
PMS2P54278 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.22□□□□□ -1.89
PMS2P54278 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AL627309.6-201ENST00000606857 840 ntBASIC3.22□□□□□ -1.89
PMS2P54278 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AC005858.4-201ENST00000623191 700 ntBASIC3.22□□□□□ -1.89
PMS2P54278 AC090617.7-201ENST00000623952 126 ntBASIC3.22□□□□□ -1.89
PMS2P54278 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
PMS2P54278 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
PMS2P54278 AC092435.3-201ENST00000565538 3654 ntBASIC3.21□□□□□ -1.9
PMS2P54278 Z83843.1-201ENST00000604070 3685 ntBASIC3.21□□□□□ -1.9
PMS2P54278 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.21□□□□□ -1.9
PMS2P54278 RNU6-1167P-201ENST00000363227 94 ntBASIC3.21□□□□□ -1.9
PMS2P54278 Y_RNA.245-201ENST00000364493 95 ntBASIC3.21□□□□□ -1.9
PMS2P54278 Y_RNA.813-201ENST00000364639 102 ntBASIC3.21□□□□□ -1.9
PMS2P54278 RNU6-217P-201ENST00000384164 104 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AL356432.1-201ENST00000405809 419 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.21□□□□□ -1.9
PMS2P54278 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.21□□□□□ -1.9
PMS2P54278 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 219.4 ms