Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 Y_RNA.327-201ENST00000365201 102 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 RNU6-658P-201ENST00000384606 106 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 TPMTP3-201ENST00000411928 735 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 AL135790.2-201ENST00000437701 267 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 ARPC3P5-201ENST00000448802 534 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 AC092001.1-201ENST00000453012 261 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 RNU7-140P-201ENST00000459546 60 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 MEMO1P3-201ENST00000459811 302 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.76□□□□□ -2.29
POLR2JP52435 AC091860.1-201ENST00000505723 432 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.76□□□□□ -2.29
POLR2JP52435 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.76□□□□□ -2.29
POLR2JP52435 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 MIR4524B-201ENST00000581569 115 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.76□□□□□ -2.29
POLR2JP52435 AC084824.4-201ENST00000620106 731 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 AC017037.3-201ENST00000625016 472 ntBASIC0.76□□□□□ -2.29
POLR2JP52435 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.76□□□□□ -2.29
POLR2JP52435 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.76□□□□□ -2.29
POLR2JP52435 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
POLR2JP52435 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
POLR2JP52435 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.75□□□□□ -2.29
POLR2JP52435 RNU5E-1-201ENST00000362477 120 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 RNU1-22P-201ENST00000363334 158 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
POLR2JP52435 RNU2-68P-201ENST00000410878 191 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.75□□□□□ -2.29
POLR2JP52435 AC104058.1-201ENST00000448028 297 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.75□□□□□ -2.29
POLR2JP52435 snoU13.9-201ENST00000458927 103 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.75□□□□□ -2.29
POLR2JP52435 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.75□□□□□ -2.29
POLR2JP52435 AC008628.1-201ENST00000508663 265 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
POLR2JP52435 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.75□□□□□ -2.29
POLR2JP52435 AL139344.1-201ENST00000605228 195 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 AL390208.1-201ENST00000605885 644 ntBASIC0.75□□□□□ -2.29
POLR2JP52435 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.75□□□□□ -2.29
POLR2JP52435 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.74□□□□□ -2.29
POLR2JP52435 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
POLR2JP52435 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
POLR2JP52435 RNU1-58P-201ENST00000362413 163 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 RNU6-637P-201ENST00000384050 107 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 SNORA70.7-201ENST00000384159 133 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 SNORD14D-201ENST00000384390 87 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 SNORA48.1-201ENST00000390879 135 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 DHFRP6-201ENST00000401776 268 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AL133475.1-201ENST00000404414 305 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AL139397.2-201ENST00000404529 772 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 BTF3L4P3-201ENST00000418879 476 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AL139421.1-201ENST00000423010 169 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 VN1R42P-201ENST00000424651 344 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 RPS27P16-201ENST00000425758 201 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 RPS15AP9-201ENST00000439856 381 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 MTCYBP11-201ENST00000447254 1109 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
POLR2JP52435 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 OFD1P3Y-201ENST00000453312 783 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 GTF2IP12-201ENST00000456547 356 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 PRELID3BP1-201ENST00000457142 540 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AC013267.1-201ENST00000458227 267 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR2JP52435 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR2JP52435 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 RNVU1-2-201ENST00000516326 135 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.74□□□□□ -2.29
POLR2JP52435 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.74□□□□□ -2.29
POLR2JP52435 AL731537.2-201ENST00000561565 951 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 ADAM3B-201ENST00000569937 840 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AC098848.2-201ENST00000588023 330 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AL355598.1-201ENST00000604169 202 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 AC097468.3-201ENST00000607956 456 ntBASIC0.74□□□□□ -2.29
POLR2JP52435 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
POLR2JP52435 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.74□□□□□ -2.29
POLR2JP52435 AL161781.1-201ENST00000354277 403 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 SUGT1P1-201ENST00000379514 476 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 MIR515-2-201ENST00000384883 83 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 MIR515-1-201ENST00000384884 83 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
POLR2JP52435 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
POLR2JP52435 MIR1302-8-201ENST00000408342 128 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.73□□□□□ -2.29
POLR2JP52435 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.73□□□□□ -2.29
POLR2JP52435 AC007000.2-201ENST00000442564 487 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.73□□□□□ -2.29
POLR2JP52435 RPL39P6-201ENST00000448289 150 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 RPS26P55-201ENST00000471178 356 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 RPL7P43-201ENST00000478876 753 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.73□□□□□ -2.29
POLR2JP52435 TMEM251P1-201ENST00000503717 318 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AC112198.4-201ENST00000515450 351 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 SNORA31.16-201ENST00000516773 139 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AC090115.3-201ENST00000553218 849 ntBASIC0.73□□□□□ -2.29
POLR2JP52435 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.73□□□□□ -2.29
POLR2JP52435 AC012414.6-201ENST00000568241 401 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms