Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HSPD1P21-201ENST00000436541 245 ntBASIC4.58□□□□□ -1.68
USP11P51784 AC098831.1-201ENST00000440661 216 ntBASIC4.58□□□□□ -1.68
USP11P51784 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.58□□□□□ -1.68
USP11P51784 snoU13.3-201ENST00000459441 104 ntBASIC4.58□□□□□ -1.68
USP11P51784 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.58□□□□□ -1.68
USP11P51784 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.58□□□□□ -1.68
USP11P51784 AC020593.1-201ENST00000507399 299 ntBASIC4.58□□□□□ -1.68
USP11P51784 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.58□□□□□ -1.68
USP11P51784 MIR892C-201ENST00000516410 77 ntBASIC4.58□□□□□ -1.68
USP11P51784 RNU6-840P-201ENST00000517275 65 ntBASIC4.58□□□□□ -1.68
USP11P51784 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.58□□□□□ -1.68
USP11P51784 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.58□□□□□ -1.68
USP11P51784 SYF2P1-201ENST00000550658 413 ntBASIC4.58□□□□□ -1.68
USP11P51784 AL442163.3-201ENST00000554110 156 ntBASIC4.58□□□□□ -1.68
USP11P51784 AC006077.1-201ENST00000604746 343 ntBASIC4.58□□□□□ -1.68
USP11P51784 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.58□□□□□ -1.68
USP11P51784 AC034102.8-201ENST00000615146 484 ntBASIC4.58□□□□□ -1.68
USP11P51784 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
USP11P51784 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
USP11P51784 LINC02555-201ENST00000563933 1951 ntBASIC4.58□□□□□ -1.68
USP11P51784 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP11P51784 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 MAPK10-253ENST00000641010 4072 ntBASIC4.57□□□□□ -1.68
USP11P51784 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USP11P51784 MIR372-201ENST00000362225 67 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-37P-201ENST00000362692 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 Y_RNA.143-201ENST00000363520 106 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-682P-201ENST00000363843 106 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-11P-201ENST00000364234 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-7-201ENST00000364784 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-8-201ENST00000365467 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-25P-201ENST00000383873 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-1-201ENST00000383898 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 Y_RNA.439-201ENST00000384119 94 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-36P-201ENST00000384172 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-4P-201ENST00000384205 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-5P-201ENST00000384238 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 SNORA36C-201ENST00000384289 132 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-3P-201ENST00000384314 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-16P-201ENST00000384385 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-15P-201ENST00000384534 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-2-201ENST00000384627 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-29P-201ENST00000384637 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNU6-9-201ENST00000384776 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USP11P51784 RPL21P65-201ENST00000406094 466 ntBASIC4.57□□□□□ -1.68
USP11P51784 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.57□□□□□ -1.68
USP11P51784 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.57□□□□□ -1.68
USP11P51784 AC004552.1-201ENST00000419089 348 ntBASIC4.57□□□□□ -1.68
USP11P51784 AL117339.2-201ENST00000430475 180 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC091286.1-201ENST00000431233 461 ntBASIC4.57□□□□□ -1.68
USP11P51784 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.57□□□□□ -1.68
USP11P51784 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.57□□□□□ -1.68
USP11P51784 RPS26P3-201ENST00000470205 348 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC090543.2-201ENST00000483963 348 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC004057.1-201ENST00000485827 348 ntBASIC4.57□□□□□ -1.68
USP11P51784 RPS15AP34-201ENST00000487776 387 ntBASIC4.57□□□□□ -1.68
USP11P51784 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 SCARNA24.2-201ENST00000516968 130 ntBASIC4.57□□□□□ -1.68
USP11P51784 RNA5SP471-201ENST00000516971 106 ntBASIC4.57□□□□□ -1.68
USP11P51784 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
USP11P51784 AC120057.2-201ENST00000571520 271 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.57□□□□□ -1.68
USP11P51784 VN1R85P-201ENST00000601587 426 ntBASIC4.57□□□□□ -1.68
USP11P51784 BDH2P1-201ENST00000602288 736 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC009314.1-201ENST00000603871 304 ntBASIC4.57□□□□□ -1.68
USP11P51784 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 RNU6-6P-201ENST00000606623 107 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC009318.2-201ENST00000610917 651 ntBASIC4.57□□□□□ -1.68
USP11P51784 MIR8076-201ENST00000611401 83 ntBASIC4.57□□□□□ -1.68
USP11P51784 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 MIR4275-201ENST00000636486 87 ntBASIC4.57□□□□□ -1.68
USP11P51784 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
USP11P51784 AC016588.2-201ENST00000632484 3021 ntBASIC4.57□□□□□ -1.68
USP11P51784 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP11P51784 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
USP11P51784 Z82217.1-201ENST00000625157 8149 ntBASIC4.57□□□□□ -1.68
USP11P51784 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP11P51784 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
USP11P51784 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.56□□□□□ -1.68
USP11P51784 UBE2L2-201ENST00000254302 429 ntBASIC4.56□□□□□ -1.68
USP11P51784 Y_RNA.76-201ENST00000362931 109 ntBASIC4.56□□□□□ -1.68
USP11P51784 Y_RNA.199-201ENST00000364014 102 ntBASIC4.56□□□□□ -1.68
USP11P51784 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
USP11P51784 Y_RNA.581-201ENST00000391017 97 ntBASIC4.56□□□□□ -1.68
USP11P51784 RPL21P75-201ENST00000396599 483 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms