Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.57□□□□□ -1.84
CLK3P49761 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.57□□□□□ -1.84
CLK3P49761 GMPSP1-201ENST00000514075 579 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RN7SKP40-201ENST00000517211 242 ntBASIC3.57□□□□□ -1.84
CLK3P49761 RN7SKP289-201ENST00000517244 295 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC131281.1-201ENST00000522984 164 ntBASIC3.57□□□□□ -1.84
CLK3P49761 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
CLK3P49761 OR4H12P-201ENST00000556269 907 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
CLK3P49761 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.57□□□□□ -1.84
CLK3P49761 Z98751.3-201ENST00000604447 521 ntBASIC3.57□□□□□ -1.84
CLK3P49761 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLK3P49761 AC048347.1-201ENST00000624621 427 ntBASIC3.57□□□□□ -1.84
CLK3P49761 AC068724.3-201ENST00000625906 87 ntBASIC3.57□□□□□ -1.84
CLK3P49761 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.57□□□□□ -1.84
CLK3P49761 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.57□□□□□ -1.84
CLK3P49761 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLK3P49761 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
CLK3P49761 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLK3P49761 AC032011.1-201ENST00000611703 1549 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RNU5A-1-201ENST00000362698 116 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RNU6-701P-201ENST00000384059 107 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RNU6-209P-201ENST00000384118 107 ntBASIC3.56□□□□□ -1.84
CLK3P49761 Y_RNA.485-201ENST00000384395 102 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RNU6-306P-201ENST00000384617 107 ntBASIC3.56□□□□□ -1.84
CLK3P49761 MIR1252-201ENST00000408861 65 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.56□□□□□ -1.84
CLK3P49761 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.56□□□□□ -1.84
CLK3P49761 TBCAP1-201ENST00000436520 327 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RPS29P31-201ENST00000446147 164 ntBASIC3.56□□□□□ -1.84
CLK3P49761 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.56□□□□□ -1.84
CLK3P49761 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RPS23P3-201ENST00000470993 430 ntBASIC3.56□□□□□ -1.84
CLK3P49761 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLK3P49761 AC010631.1-201ENST00000474150 156 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.56□□□□□ -1.84
CLK3P49761 AC068781.1-201ENST00000488231 618 ntBASIC3.56□□□□□ -1.84
CLK3P49761 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLK3P49761 SUB1P3-201ENST00000564581 315 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.56□□□□□ -1.84
CLK3P49761 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.56□□□□□ -1.84
CLK3P49761 AL158032.1-201ENST00000605401 106 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AP002826.1-201ENST00000608835 315 ntBASIC3.56□□□□□ -1.84
CLK3P49761 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AL731566.2-201ENST00000618971 317 ntBASIC3.56□□□□□ -1.84
CLK3P49761 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.56□□□□□ -1.84
CLK3P49761 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLK3P49761 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CLK3P49761 AF127577.6-201ENST00000623352 2191 ntBASIC3.56□□□□□ -1.84
CLK3P49761 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 Y_RNA.106-201ENST00000363189 100 ntBASIC3.55□□□□□ -1.84
CLK3P49761 Y_RNA.210-201ENST00000364161 110 ntBASIC3.55□□□□□ -1.84
CLK3P49761 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.55□□□□□ -1.84
CLK3P49761 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
CLK3P49761 RNU6-713P-201ENST00000384761 107 ntBASIC3.55□□□□□ -1.84
CLK3P49761 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLK3P49761 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.55□□□□□ -1.84
CLK3P49761 PGBD4P6-201ENST00000421501 610 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.55□□□□□ -1.84
CLK3P49761 AC097713.2-201ENST00000430199 356 ntBASIC3.55□□□□□ -1.84
CLK3P49761 ARL5AP4-201ENST00000430731 512 ntBASIC3.55□□□□□ -1.84
CLK3P49761 MTND2P29-201ENST00000438595 412 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC011816.1-201ENST00000441346 546 ntBASIC3.55□□□□□ -1.84
CLK3P49761 DYNLT3P2-201ENST00000442517 295 ntBASIC3.55□□□□□ -1.84
CLK3P49761 NUTF2P7-201ENST00000453086 375 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AL353752.1-201ENST00000454946 260 ntBASIC3.55□□□□□ -1.84
CLK3P49761 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.55□□□□□ -1.84
CLK3P49761 RNU6-390P-201ENST00000516259 103 ntBASIC3.55□□□□□ -1.84
CLK3P49761 RNA5SP468-201ENST00000516782 93 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC087369.1-201ENST00000520775 996 ntBASIC3.55□□□□□ -1.84
CLK3P49761 IGKV2D-19-201ENST00000523346 262 ntBASIC3.55□□□□□ -1.84
CLK3P49761 YPEL5P3-201ENST00000547227 352 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.55□□□□□ -1.84
CLK3P49761 HSBP1P1-201ENST00000555205 166 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CLK3P49761 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
CLK3P49761 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.55□□□□□ -1.84
CLK3P49761 VN1R85P-201ENST00000601587 426 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC016727.2-201ENST00000603988 621 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC004805.2-201ENST00000605382 482 ntBASIC3.55□□□□□ -1.84
CLK3P49761 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC005344.1-201ENST00000613391 459 ntBASIC3.55□□□□□ -1.84
CLK3P49761 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC138627.2-201ENST00000624202 601 ntBASIC3.55□□□□□ -1.84
CLK3P49761 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CLK3P49761 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.55□□□□□ -1.84
CLK3P49761 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.55□□□□□ -1.84
CLK3P49761 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLK3P49761 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CLK3P49761 AC005183.1-201ENST00000603687 1979 ntBASIC3.54□□□□□ -1.84
CLK3P49761 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLK3P49761 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CLK3P49761 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLK3P49761 RNU6-213P-201ENST00000384051 104 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms