Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 OR5AK4P-201ENST00000635912 903 ntBASIC2.5□□□□□ -2.01
CDX1P47902 MIR6863-201ENST00000636112 90 ntBASIC2.5□□□□□ -2.01
CDX1P47902 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.5□□□□□ -2.01
CDX1P47902 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDX1P47902 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDX1P47902 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDX1P47902 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX1P47902 AL359854.1-201ENST00000614203 1594 ntBASIC2.49□□□□□ -2.01
CDX1P47902 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX1P47902 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDX1P47902 AC080128.1-201ENST00000474389 1917 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RNU6-384P-201ENST00000364900 104 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RNU6-72P-201ENST00000384285 79 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RPS4XP8-201ENST00000402039 771 ntBASIC2.49□□□□□ -2.01
CDX1P47902 HMGN2P35-201ENST00000412164 270 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX1P47902 MTCO2P7-201ENST00000446518 666 ntBASIC2.49□□□□□ -2.01
CDX1P47902 SNRPFP3-201ENST00000457792 225 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RN7SL863P-201ENST00000462370 296 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RPL36AP48-201ENST00000485521 314 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RPL22P13-201ENST00000493291 347 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX1P47902 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX1P47902 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.49□□□□□ -2.01
CDX1P47902 LRRC34P2-201ENST00000514850 553 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RNU1-86P-201ENST00000516108 154 ntBASIC2.49□□□□□ -2.01
CDX1P47902 RNU1-107P-201ENST00000516617 154 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AP004607.1-201ENST00000524456 203 ntBASIC2.49□□□□□ -2.01
CDX1P47902 HSPE1P20-201ENST00000538133 289 ntBASIC2.49□□□□□ -2.01
CDX1P47902 ELOCP31-201ENST00000540463 467 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC135279.1-201ENST00000543493 504 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR2682-201ENST00000580305 110 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR3200-201ENST00000580767 85 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR3199-1-201ENST00000582434 88 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR3670-2-201ENST00000582974 65 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR3670-1-201ENST00000584160 65 ntBASIC2.49□□□□□ -2.01
CDX1P47902 MIR3670-3-201ENST00000584855 65 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC073539.2-201ENST00000597113 165 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC008121.1-201ENST00000603244 268 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AL670379.10-201ENST00000604330 253 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AL670379.9-201ENST00000605428 253 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.49□□□□□ -2.01
CDX1P47902 MIR3670-4-201ENST00000612260 65 ntBASIC2.49□□□□□ -2.01
CDX1P47902 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.49□□□□□ -2.01
CDX1P47902 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC026585.1-201ENST00000619582 524 ntBASIC2.49□□□□□ -2.01
CDX1P47902 AC018692.3-201ENST00000623929 123 ntBASIC2.49□□□□□ -2.01
CDX1P47902 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDX1P47902 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.49□□□□□ -2.01
CDX1P47902 AL109809.4-201ENST00000603520 2185 ntBASIC2.49□□□□□ -2.01
CDX1P47902 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDX1P47902 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX1P47902 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CDX1P47902 AC138393.1-203ENST00000327086 343 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNU6-996P-201ENST00000365438 107 ntBASIC2.48□□□□□ -2.01
CDX1P47902 Y_RNA.381-201ENST00000365666 102 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNU6-517P-201ENST00000384362 110 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNU6-393P-201ENST00000384475 107 ntBASIC2.48□□□□□ -2.01
CDX1P47902 Y_RNA.517-201ENST00000384551 106 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AL133475.1-201ENST00000404414 305 ntBASIC2.48□□□□□ -2.01
CDX1P47902 CIR1P3-201ENST00000405137 479 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNA5SP229-201ENST00000410809 99 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNU2-25P-201ENST00000411041 191 ntBASIC2.48□□□□□ -2.01
CDX1P47902 RNA5SP492-201ENST00000411330 114 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AL096701.2-201ENST00000416920 238 ntBASIC2.48□□□□□ -2.01
CDX1P47902 MTCYBP8-201ENST00000422855 651 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX1P47902 AC023141.11-201ENST00000508864 202 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 RN7SKP219-201ENST00000516825 296 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX1P47902 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 BNIP3P6-201ENST00000549284 499 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AGGF1P4-201ENST00000568249 801 ntBASIC2.48□□□□□ -2.01
CDX1P47902 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 AC010378.1-201ENST00000619270 362 ntBASIC2.48□□□□□ -2.01
CDX1P47902 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
CDX1P47902 AC139792.3-201ENST00000623525 224 ntBASIC2.48□□□□□ -2.01
CDX1P47902 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.48□□□□□ -2.01
CDX1P47902 AC091903.1-201ENST00000624322 454 ntBASIC2.48□□□□□ -2.01
CDX1P47902 SCARNA4-202ENST00000625402 129 ntBASIC2.48□□□□□ -2.01
CDX1P47902 MIR622-201ENST00000638396 96 ntBASIC2.48□□□□□ -2.01
CDX1P47902 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.48□□□□□ -2.01
CDX1P47902 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CDX1P47902 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CDX1P47902 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDX1P47902 MTND4P27-201ENST00000450813 1354 ntBASIC2.48□□□□□ -2.01
CDX1P47902 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX1P47902 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.47□□□□□ -2.01
CDX1P47902 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CDX1P47902 RNU6-623P-201ENST00000363143 105 ntBASIC2.47□□□□□ -2.01
CDX1P47902 RNU6-525P-201ENST00000363685 104 ntBASIC2.47□□□□□ -2.01
CDX1P47902 RNU4-75P-201ENST00000364621 146 ntBASIC2.47□□□□□ -2.01
CDX1P47902 Y_RNA.318-201ENST00000365131 97 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms