Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.79□□□□□ -1.96
HNF4AP41235 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.79□□□□□ -1.96
HNF4AP41235 AC024153.1-201ENST00000603103 365 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 AL121992.2-201ENST00000606262 256 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
HNF4AP41235 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.79□□□□□ -1.96
HNF4AP41235 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HNF4AP41235 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
HNF4AP41235 NACAP2-201ENST00000318548 624 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 RNU6-1085P-201ENST00000363576 107 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 RNU6-1097P-201ENST00000363586 107 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 RNU5E-6P-201ENST00000365574 115 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HNF4AP41235 RNU2-9P-201ENST00000410194 145 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 MICF-203ENST00000432679 129 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.78□□□□□ -1.96
HNF4AP41235 RN7SL432P-201ENST00000484057 298 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC079382.1-201ENST00000493346 557 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.78□□□□□ -1.96
HNF4AP41235 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 AC023141.11-201ENST00000508864 202 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 RNU2-10P-201ENST00000516375 211 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 RNU6-143P-201ENST00000516942 93 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 AC134698.4-201ENST00000523451 826 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC011979.2-201ENST00000527568 352 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC104383.1-201ENST00000530297 370 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC006199.1-201ENST00000548728 219 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC234778.2-201ENST00000566241 354 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC025678.1-201ENST00000567861 338 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AL451007.1-201ENST00000595491 289 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 ATP1B3P1-201ENST00000605365 821 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AC007619.2-201ENST00000605743 379 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 AP001330.5-201ENST00000607176 411 ntBASIC2.78□□□□□ -1.96
HNF4AP41235 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HNF4AP41235 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HNF4AP41235 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HNF4AP41235 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HNF4AP41235 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
HNF4AP41235 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
HNF4AP41235 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.97
HNF4AP41235 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HNF4AP41235 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 AC093536.2-201ENST00000565257 1406 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MTND5P30-201ENST00000452896 1731 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RNU6-1120P-201ENST00000362988 108 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RNU6-188P-201ENST00000364207 107 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.77□□□□□ -1.97
HNF4AP41235 Y_RNA.402-201ENST00000383972 102 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MIR558-201ENST00000384920 94 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.77□□□□□ -1.97
HNF4AP41235 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.77□□□□□ -1.97
HNF4AP41235 EEF1A1P41-201ENST00000414667 207 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MTCO1P20-201ENST00000425366 358 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AC093106.2-201ENST00000428212 385 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.77□□□□□ -1.97
HNF4AP41235 MTND1P2-201ENST00000430604 821 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MTATP6P16-201ENST00000434543 526 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RPS20P5-201ENST00000434808 360 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RPL23AP83-201ENST00000434984 473 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AL161651.1-201ENST00000440882 223 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 FDX1P2-201ENST00000450769 375 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 RNU6-953P-201ENST00000459154 107 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.77□□□□□ -1.97
HNF4AP41235 SNORA31.6-201ENST00000516241 130 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 SNORA74D-201ENST00000516404 141 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MIR3199-1-201ENST00000582434 88 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 AP000907.4-201ENST00000604143 237 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 AP002360.4-201ENST00000606980 481 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 MIR1321-201ENST00000637766 79 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.77□□□□□ -1.97
HNF4AP41235 ZNF680P1-201ENST00000436625 1469 ntBASIC2.77□□□□□ -1.97
HNF4AP41235 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
HNF4AP41235 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.76□□□□□ -1.97
HNF4AP41235 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
HNF4AP41235 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HNF4AP41235 HSPE1P11-201ENST00000339579 310 ntBASIC2.76□□□□□ -1.97
HNF4AP41235 RNU1-140P-201ENST00000365040 165 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms