Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC127391.1-201ENST00000411737 98 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 AL158823.1-201ENST00000418441 478 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 AC083875.1-201ENST00000419509 405 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.57□□□□□ -2.16
RPA3P35244 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.57□□□□□ -2.16
RPA3P35244 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 snoU109.1-201ENST00000459339 135 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.57□□□□□ -2.16
RPA3P35244 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.57□□□□□ -2.16
RPA3P35244 OR5B19P-201ENST00000531766 928 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
RPA3P35244 PSMA3P-201ENST00000555485 635 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPA3P35244 AC009712.1-201ENST00000564938 316 ntBASIC1.57□□□□□ -2.16
RPA3P35244 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC104984.5-201ENST00000586878 94 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AL596327.1-201ENST00000603629 213 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AL670379.10-201ENST00000604330 253 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AL670379.9-201ENST00000605428 253 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC107952.2-201ENST00000606048 486 ntBASIC1.57□□□□□ -2.16
RPA3P35244 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.57□□□□□ -2.16
RPA3P35244 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RPA3P35244 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.57□□□□□ -2.16
RPA3P35244 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.57□□□□□ -2.16
RPA3P35244 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.56□□□□□ -2.16
RPA3P35244 Y_RNA.192-201ENST00000363977 102 ntBASIC1.56□□□□□ -2.16
RPA3P35244 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPA3P35244 MIR518D-201ENST00000385014 87 ntBASIC1.56□□□□□ -2.16
RPA3P35244 RNU6-278P-201ENST00000390945 109 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AL136310.1-201ENST00000404926 654 ntBASIC1.56□□□□□ -2.16
RPA3P35244 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 AL358453.1-201ENST00000422522 250 ntBASIC1.56□□□□□ -2.16
RPA3P35244 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
RPA3P35244 USP9YP24-201ENST00000434374 697 ntBASIC1.56□□□□□ -2.16
RPA3P35244 NEFMP1-201ENST00000443423 1006 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 RPL7P43-201ENST00000478876 753 ntBASIC1.56□□□□□ -2.16
RPA3P35244 RPL39P36-201ENST00000490784 156 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AC108210.2-201ENST00000503681 201 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.56□□□□□ -2.16
RPA3P35244 AC116353.3-201ENST00000511215 249 ntBASIC1.56□□□□□ -2.16
RPA3P35244 RNU6-143P-201ENST00000516942 93 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 DEFB108A-201ENST00000530110 222 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.56□□□□□ -2.16
RPA3P35244 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.56□□□□□ -2.16
RPA3P35244 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.56□□□□□ -2.16
RPA3P35244 BNIP3P9-201ENST00000603714 553 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AL358072.1-201ENST00000604156 575 ntBASIC1.56□□□□□ -2.16
RPA3P35244 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPA3P35244 AC108479.2-201ENST00000617314 601 ntBASIC1.56□□□□□ -2.16
RPA3P35244 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.56□□□□□ -2.16
RPA3P35244 AC131280.1-202ENST00000624067 4211 ntBASIC1.56□□□□□ -2.16
RPA3P35244 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.56□□□□□ -2.16
RPA3P35244 RNU6-1257P-201ENST00000384625 110 ntBASIC1.55□□□□□ -2.16
RPA3P35244 MIR764-201ENST00000390811 85 ntBASIC1.55□□□□□ -2.16
RPA3P35244 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPA3P35244 ERHP2-201ENST00000402323 299 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AL356432.1-201ENST00000405809 419 ntBASIC1.55□□□□□ -2.16
RPA3P35244 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RPA3P35244 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.55□□□□□ -2.16
RPA3P35244 AC244636.1-201ENST00000421152 228 ntBASIC1.55□□□□□ -2.16
RPA3P35244 BX510359.4-201ENST00000423750 193 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.55□□□□□ -2.16
RPA3P35244 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
RPA3P35244 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.55□□□□□ -2.16
RPA3P35244 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.55□□□□□ -2.16
RPA3P35244 BTF3P15-201ENST00000455606 336 ntBASIC1.55□□□□□ -2.16
RPA3P35244 snoU13.23-201ENST00000458863 104 ntBASIC1.55□□□□□ -2.16
RPA3P35244 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
RPA3P35244 RNU5B-3P-201ENST00000516601 115 ntBASIC1.55□□□□□ -2.16
RPA3P35244 SNORA31.19-201ENST00000517079 126 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC091163.3-201ENST00000518269 1144 ntBASIC1.55□□□□□ -2.16
RPA3P35244 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.55□□□□□ -2.16
RPA3P35244 AP000907.2-201ENST00000530827 353 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.55□□□□□ -2.16
RPA3P35244 NDUFA5P6-201ENST00000542110 379 ntBASIC1.55□□□□□ -2.16
RPA3P35244 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.55□□□□□ -2.16
RPA3P35244 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.55□□□□□ -2.16
RPA3P35244 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.55□□□□□ -2.16
RPA3P35244 AC026271.5-201ENST00000577873 130 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AL078605.1-201ENST00000603529 500 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC007363.1-201ENST00000604736 620 ntBASIC1.55□□□□□ -2.16
RPA3P35244 ELOCP5-201ENST00000604924 333 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC087045.1-201ENST00000605856 382 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC008121.3-201ENST00000618726 433 ntBASIC1.55□□□□□ -2.16
RPA3P35244 AC006386.1-201ENST00000619436 415 ntBASIC1.55□□□□□ -2.16
RPA3P35244 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.55□□□□□ -2.16
RPA3P35244 AC099654.8-201ENST00000637757 681 ntBASIC1.55□□□□□ -2.16
RPA3P35244 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
RPA3P35244 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RPA3P35244 RNU6-462P-201ENST00000362659 105 ntBASIC1.54□□□□□ -2.16
RPA3P35244 SNORD115-3-201ENST00000363100 82 ntBASIC1.54□□□□□ -2.16
RPA3P35244 SNORD116.1-201ENST00000365628 92 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms