Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.55□□□□□ -2
CTNNA1P35221 AC012360.2-201ENST00000609349 391 ntBASIC2.55□□□□□ -2
CTNNA1P35221 AC008121.3-201ENST00000618726 433 ntBASIC2.55□□□□□ -2
CTNNA1P35221 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
CTNNA1P35221 AC092608.2-201ENST00000624427 218 ntBASIC2.55□□□□□ -2
CTNNA1P35221 AC006386.2-201ENST00000624491 75 ntBASIC2.55□□□□□ -2
CTNNA1P35221 AC012005.1-201ENST00000624575 75 ntBASIC2.55□□□□□ -2
CTNNA1P35221 SCARNA4-202ENST00000625402 129 ntBASIC2.55□□□□□ -2
CTNNA1P35221 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
CTNNA1P35221 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTNNA1P35221 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
CTNNA1P35221 MTND4P4-201ENST00000439033 1366 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RNU5A-2P-201ENST00000384337 116 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RNU1-57P-201ENST00000384491 166 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RNU6-1179P-201ENST00000384667 107 ntBASIC2.54□□□□□ -2
CTNNA1P35221 SNORA80E-201ENST00000384744 137 ntBASIC2.54□□□□□ -2
CTNNA1P35221 SNORA11.1-201ENST00000408133 129 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.54□□□□□ -2
CTNNA1P35221 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.54□□□□□ -2
CTNNA1P35221 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.54□□□□□ -2
CTNNA1P35221 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RPL23AP45-201ENST00000476406 468 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC004263.1-201ENST00000479327 332 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC109486.1-201ENST00000486833 374 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC097462.2-201ENST00000504623 481 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.54□□□□□ -2
CTNNA1P35221 SNORA48.11-201ENST00000517015 89 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.54□□□□□ -2
CTNNA1P35221 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.54□□□□□ -2
CTNNA1P35221 MIR548AB-201ENST00000584917 84 ntBASIC2.54□□□□□ -2
CTNNA1P35221 BNIP3P8-201ENST00000597863 560 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AL033523.1-201ENST00000605153 153 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC021646.1-201ENST00000605469 484 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.54□□□□□ -2
CTNNA1P35221 AC019226.2-201ENST00000625973 424 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
CTNNA1P35221 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.54□□□□□ -2
CTNNA1P35221 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.54□□□□□ -2
CTNNA1P35221 AC005336.3-201ENST00000623833 2679 ntBASIC2.54□□□□□ -2
CTNNA1P35221 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CTNNA1P35221 Y_RNA.22-201ENST00000362492 102 ntBASIC2.53□□□□□ -2
CTNNA1P35221 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
CTNNA1P35221 AL031577.2-201ENST00000404133 280 ntBASIC2.53□□□□□ -2
CTNNA1P35221 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.53□□□□□ -2
CTNNA1P35221 RNA5SP111-201ENST00000411386 101 ntBASIC2.53□□□□□ -2
CTNNA1P35221 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.53□□□□□ -2
CTNNA1P35221 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
CTNNA1P35221 RNU6-759P-201ENST00000516740 103 ntBASIC2.53□□□□□ -2
CTNNA1P35221 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
CTNNA1P35221 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.53□□□□□ -2
CTNNA1P35221 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.53□□□□□ -2
CTNNA1P35221 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.53□□□□□ -2
CTNNA1P35221 MTATP6P24-201ENST00000576835 677 ntBASIC2.53□□□□□ -2
CTNNA1P35221 AC091304.9-201ENST00000612091 226 ntBASIC2.53□□□□□ -2
CTNNA1P35221 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.53□□□□□ -2
CTNNA1P35221 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CTNNA1P35221 HAUS6P2-201ENST00000433254 2404 ntBASIC2.53□□□□□ -2
CTNNA1P35221 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CTNNA1P35221 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CTNNA1P35221 RNU6-942P-201ENST00000363002 107 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 RNU6-179P-201ENST00000363350 107 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 MIR578-201ENST00000384828 96 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CTNNA1P35221 UBE2V1P10-201ENST00000414685 269 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AC063976.3-201ENST00000426849 329 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.52□□□□□ -2.01
CTNNA1P35221 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.52□□□□□ -2.01
CTNNA1P35221 MTND6P13-201ENST00000443510 523 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.52□□□□□ -2.01
CTNNA1P35221 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
CTNNA1P35221 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.52□□□□□ -2.01
CTNNA1P35221 RAP1BP2-201ENST00000478270 544 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
CTNNA1P35221 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.52□□□□□ -2.01
CTNNA1P35221 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AC005771.1-201ENST00000585581 349 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AC122133.1-201ENST00000613964 233 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AC025034.2-201ENST00000623264 286 ntBASIC2.52□□□□□ -2.01
CTNNA1P35221 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.52□□□□□ -2.01
CTNNA1P35221 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.52□□□□□ -2.01
CTNNA1P35221 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CTNNA1P35221 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CTNNA1P35221 RNU6-1010P-201ENST00000362757 107 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 RNU6-525P-201ENST00000363685 104 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 RNU6-61P-201ENST00000365528 109 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 SNORA6-201ENST00000384033 151 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 AL359511.1-201ENST00000402970 211 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 AL355497.1-201ENST00000406262 551 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 RNU6-1140P-201ENST00000410517 106 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 AL031779.1-201ENST00000415663 330 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 EDDM3CP-201ENST00000415977 425 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.51□□□□□ -2.01
CTNNA1P35221 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.51□□□□□ -2.01
CTNNA1P35221 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.51□□□□□ -2.01
CTNNA1P35221 AC104850.1-201ENST00000435940 476 ntBASIC2.51□□□□□ -2.01
CTNNA1P35221 CALM1P1-201ENST00000442082 433 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms