Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS2P33552 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS2P33552 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS2P33552 AF038458.1-201ENST00000588406 262 ntBASIC0.73□□□□□ -2.29
CKS2P33552 AP001542.2-201ENST00000593141 364 ntBASIC0.73□□□□□ -2.29
CKS2P33552 AC098614.4-201ENST00000607601 462 ntBASIC0.73□□□□□ -2.29
CKS2P33552 AC253576.2-201ENST00000618815 580 ntBASIC0.73□□□□□ -2.29
CKS2P33552 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS2P33552 RNU6-188P-201ENST00000364207 107 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RNU6-546P-201ENST00000383991 107 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RNU6-481P-201ENST00000384194 107 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RNU6-549P-201ENST00000384433 107 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RNU6-1274P-201ENST00000384557 107 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AL021407.1-201ENST00000404531 386 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RPL21P90-201ENST00000415692 466 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.72□□□□□ -2.29
CKS2P33552 HMGB3P12-201ENST00000438745 556 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC087477.1-201ENST00000465747 340 ntBASIC0.72□□□□□ -2.29
CKS2P33552 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.72□□□□□ -2.29
CKS2P33552 RPL30P12-201ENST00000474666 353 ntBASIC0.72□□□□□ -2.29
CKS2P33552 RNA5SP404-201ENST00000517118 132 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC109329.1-201ENST00000518744 317 ntBASIC0.72□□□□□ -2.29
CKS2P33552 CENPUP1-201ENST00000526649 1202 ntBASIC0.72□□□□□ -2.29
CKS2P33552 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.72□□□□□ -2.29
CKS2P33552 SUB1P4-201ENST00000566062 339 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC138915.2-201ENST00000569776 97 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.72□□□□□ -2.29
CKS2P33552 AL450270.1-201ENST00000606160 391 ntBASIC0.72□□□□□ -2.29
CKS2P33552 Z82243.1-201ENST00000609432 473 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC004908.3-201ENST00000610248 625 ntBASIC0.72□□□□□ -2.29
CKS2P33552 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CKS2P33552 HAUS6P2-201ENST00000433254 2404 ntBASIC0.72□□□□□ -2.29
CKS2P33552 AC138393.1-203ENST00000327086 343 ntBASIC0.71□□□□□ -2.3
CKS2P33552 Y_RNA.25-201ENST00000362528 102 ntBASIC0.71□□□□□ -2.3
CKS2P33552 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.71□□□□□ -2.3
CKS2P33552 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS2P33552 USP9YP26-201ENST00000421008 661 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC139712.2-201ENST00000424302 339 ntBASIC0.71□□□□□ -2.3
CKS2P33552 MTCO3P45-201ENST00000443036 613 ntBASIC0.71□□□□□ -2.3
CKS2P33552 MTND1P9-201ENST00000453775 944 ntBASIC0.71□□□□□ -2.3
CKS2P33552 RN7SKP210-201ENST00000459176 261 ntBASIC0.71□□□□□ -2.3
CKS2P33552 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
CKS2P33552 RPS23P4-201ENST00000487908 423 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.71□□□□□ -2.3
CKS2P33552 MTCYBP16-201ENST00000509187 1129 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS2P33552 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS2P33552 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS2P33552 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.71□□□□□ -2.3
CKS2P33552 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS2P33552 RAB11AP2-201ENST00000545905 639 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.71□□□□□ -2.3
CKS2P33552 MIR4303-201ENST00000581299 66 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.71□□□□□ -2.3
CKS2P33552 AL583856.2-201ENST00000606298 543 ntBASIC0.71□□□□□ -2.3
CKS2P33552 AL512598.1-201ENST00000610158 273 ntBASIC0.71□□□□□ -2.3
CKS2P33552 uc_338.12-201ENST00000616344 181 ntBASIC0.71□□□□□ -2.3
CKS2P33552 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CKS2P33552 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CKS2P33552 RNU6-216P-201ENST00000363282 104 ntBASIC0.7□□□□□ -2.3
CKS2P33552 RNU6-1187P-201ENST00000364771 110 ntBASIC0.7□□□□□ -2.3
CKS2P33552 RNU6-114P-201ENST00000384704 105 ntBASIC0.7□□□□□ -2.3
CKS2P33552 MIR1267-201ENST00000408723 78 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.7□□□□□ -2.3
CKS2P33552 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.7□□□□□ -2.3
CKS2P33552 AC027644.1-201ENST00000419595 298 ntBASIC0.7□□□□□ -2.3
CKS2P33552 UBE2V2P3-201ENST00000433562 437 ntBASIC0.7□□□□□ -2.3
CKS2P33552 GTF2IP3-201ENST00000433887 494 ntBASIC0.7□□□□□ -2.3
CKS2P33552 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.7□□□□□ -2.3
CKS2P33552 AC087343.1-201ENST00000477341 475 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC108729.1-201ENST00000487812 947 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC023194.1-201ENST00000493084 308 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC108078.1-201ENST00000508073 725 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC110760.3-202ENST00000515177 371 ntBASIC0.7□□□□□ -2.3
CKS2P33552 RNU7-40P-201ENST00000516397 64 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC022616.8-201ENST00000533569 253 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.7□□□□□ -2.3
CKS2P33552 AC021171.1-201ENST00000603137 706 ntBASIC0.7□□□□□ -2.3
CKS2P33552 DPPA3P3-201ENST00000603842 430 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AL355802.3-201ENST00000607571 545 ntBASIC0.7□□□□□ -2.3
CKS2P33552 AC010975.3-201ENST00000618727 978 ntBASIC0.7□□□□□ -2.3
CKS2P33552 MIR8063-201ENST00000621930 81 ntBASIC0.7□□□□□ -2.3
CKS2P33552 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.7□□□□□ -2.3
CKS2P33552 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 AL391516.1-201ENST00000554380 2449 ntBASIC0.69□□□□□ -2.3
CKS2P33552 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
CKS2P33552 RNU6-512P-201ENST00000364438 103 ntBASIC0.69□□□□□ -2.3
CKS2P33552 RNU4-38P-201ENST00000364472 129 ntBASIC0.69□□□□□ -2.3
CKS2P33552 RNU6-26P-201ENST00000383985 107 ntBASIC0.69□□□□□ -2.3
CKS2P33552 MTND1P21-201ENST00000412991 285 ntBASIC0.69□□□□□ -2.3
CKS2P33552 TPMTP2-201ENST00000414372 726 ntBASIC0.69□□□□□ -2.3
CKS2P33552 MTCO3P5-201ENST00000433620 714 ntBASIC0.69□□□□□ -2.3
CKS2P33552 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.69□□□□□ -2.3
CKS2P33552 AL035666.1-201ENST00000446195 348 ntBASIC0.69□□□□□ -2.3
CKS2P33552 GXYLT1P1-201ENST00000446657 490 ntBASIC0.69□□□□□ -2.3
CKS2P33552 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CKS2P33552 AC009474.2-201ENST00000451383 136 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms