Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RN7SL432P-201ENST00000484057 298 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 Y_RNA.654-201ENST00000497848 106 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 AC117522.3-201ENST00000507974 584 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA11P31270 RNA5SP217-201ENST00000515959 91 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RNU6-864P-201ENST00000516256 108 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RN7SKP272-201ENST00000516988 232 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA11P31270 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 AL137161.1-201ENST00000532231 390 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 AL118558.2-201ENST00000556294 238 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 BNIP3P25-201ENST00000596023 559 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC078795.3-201ENST00000602913 472 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AC174048.1-201ENST00000603389 144 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL133255.1-201ENST00000606374 441 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA11P31270 AC093913.1-201ENST00000614178 329 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 RMST_7.1-201ENST00000621935 268 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 MIR4275-201ENST00000636486 87 ntBASIC3.27□□□□□ -1.89
HOXA11P31270 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA11P31270 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA11P31270 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA11P31270 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
HOXA11P31270 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXA11P31270 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA11P31270 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA11P31270 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA11P31270 Y_RNA.326-201ENST00000365176 113 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 RNU4-66P-201ENST00000365199 138 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 Y_RNA.339-201ENST00000365325 102 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 Y_RNA.576-201ENST00000384781 102 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 RNA5SP252-201ENST00000391131 119 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA11P31270 RPL21P24-201ENST00000413752 448 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC114491.1-201ENST00000416095 246 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA11P31270 RAC1P6-201ENST00000423911 575 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA11P31270 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA11P31270 RPL37P4-201ENST00000448908 268 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC234775.1-201ENST00000454247 670 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 SNRPFP3-201ENST00000457792 225 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 RPS29P12-201ENST00000460178 152 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 CCDC34P1-201ENST00000507441 517 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC006445.2-201ENST00000510061 472 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AP000889.1-201ENST00000530968 660 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA11P31270 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.26□□□□□ -1.89
HOXA11P31270 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA11P31270 MIR3609-201ENST00000582661 80 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA11P31270 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA11P31270 NUTF2P8-201ENST00000604593 363 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC104237.2-201ENST00000612456 443 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AC004696.1-201ENST00000614345 607 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 uc_338.34-201ENST00000617467 174 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA11P31270 AL035425.3-201ENST00000564206 4996 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 API5P2-201ENST00000397055 1498 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA11P31270 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXA11P31270 AC009812.4-201ENST00000569134 1805 ntBASIC3.26□□□□□ -1.89
HOXA11P31270 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA11P31270 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXA11P31270 SNORD56.3-201ENST00000363507 71 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 RNU6-188P-201ENST00000364207 107 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 SMIM11P1-201ENST00000369586 178 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.387-201ENST00000383918 102 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.394-201ENST00000383942 103 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 Y_RNA.414-201ENST00000384011 101 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 SNORA32.2-201ENST00000384049 122 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 RNU6-692P-201ENST00000384496 107 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 SNORD37.1-201ENST00000390968 65 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 RNU6-1197P-201ENST00000391183 107 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 AL451054.2-201ENST00000420896 202 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AF228730.4-201ENST00000421457 183 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXA11P31270 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA11P31270 CALM2P2-201ENST00000428512 440 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AL590383.1-201ENST00000428602 75 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXA11P31270 AL135938.1-201ENST00000443141 297 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXA11P31270 AC008481.1-201ENST00000463278 396 ntBASIC3.25□□□□□ -1.89
HOXA11P31270 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms