Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 Z99571.1-201ENST00000636677 394 ntBASIC1.63□□□□□ -2.15
HLA-DMAP28067 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DMAP28067 RNU6-511P-201ENST00000363496 107 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 RNU6-253P-201ENST00000384730 105 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 MIR561-201ENST00000385216 97 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL023284.1-201ENST00000403956 276 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL133475.1-201ENST00000404414 305 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 SNORD56-201ENST00000413522 71 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL160275.3-201ENST00000423876 471 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL354941.1-201ENST00000438600 464 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL606517.1-201ENST00000446914 387 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC092001.1-201ENST00000453012 261 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC108059.3-201ENST00000456388 214 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 RPL39P36-201ENST00000490784 156 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 AF131216.2-201ENST00000512316 564 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 SMURF2P1-201ENST00000514992 481 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 ZNF519P3-201ENST00000557158 1032 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC233702.2-202ENST00000562547 291 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC105129.3-201ENST00000605455 485 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC006338.1-201ENST00000618453 749 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AL589994.2-201ENST00000621124 579 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 AC243829.7-201ENST00000633081 225 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 U6.99-201ENST00000637524 83 ntBASIC1.62□□□□□ -2.15
HLA-DMAP28067 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DMAP28067 Y_RNA.18-201ENST00000362461 102 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 RNU1-72P-201ENST00000362976 153 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 SNORA8-201ENST00000384574 139 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 MTCYBP36-201ENST00000404146 440 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 USP9YP6-201ENST00000413550 854 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 ELOCP17-201ENST00000414751 326 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 RPL37P21-201ENST00000435890 276 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC118469.1-201ENST00000442943 488 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 Z73417.1-201ENST00000447373 778 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC068587.2-201ENST00000478386 781 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 MTND1P3-201ENST00000484956 952 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 RPL36AP48-201ENST00000485521 314 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC011005.2-201ENST00000487324 359 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DMAP28067 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 SNORA48.11-201ENST00000517015 89 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AP003181.2-201ENST00000528941 181 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DMAP28067 RPS3AP4-201ENST00000555161 764 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC026464.5-201ENST00000562497 722 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC025678.1-201ENST00000567861 338 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC026271.5-201ENST00000577873 130 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AP001004.1-201ENST00000582468 324 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AP000811.1-201ENST00000603803 651 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 TUSC7.1-201ENST00000610969 165 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.61□□□□□ -2.15
HLA-DMAP28067 AP002782.1-201ENST00000623107 614 ntBASIC1.61□□□□□ -2.15
HLA-DMAP28067 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DMAP28067 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DMAP28067 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HLA-DMAP28067 AL445523.1-201ENST00000451184 1362 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 RNU4-28P-201ENST00000364739 141 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 RNU5E-6P-201ENST00000365574 115 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 RNU6-898P-201ENST00000365627 104 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 Y_RNA.534-201ENST00000384599 112 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 RNA5SP212-201ENST00000391223 107 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DMAP28067 RPL22P18-201ENST00000417197 377 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 AL353621.1-201ENST00000418219 243 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 AC098592.1-201ENST00000419352 333 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 RAC1P6-201ENST00000423911 575 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 AL353777.1-201ENST00000425552 326 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 AL593851.1-201ENST00000426171 157 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 HMGB1P27-201ENST00000431429 603 ntBASIC1.6□□□□□ -2.15
HLA-DMAP28067 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DMAP28067 MTND2P29-201ENST00000438595 412 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms