Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 TRAV37-201ENST00000553906 342 ntBASIC4.67□□□□□ -1.66
LIG1P18858 MIR5696-201ENST00000578474 85 ntBASIC4.67□□□□□ -1.66
LIG1P18858 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.67□□□□□ -1.66
LIG1P18858 AP000787.2-201ENST00000604432 568 ntBASIC4.67□□□□□ -1.66
LIG1P18858 AC123912.5-201ENST00000605470 343 ntBASIC4.67□□□□□ -1.66
LIG1P18858 MIR1244-1-201ENST00000612829 85 ntBASIC4.67□□□□□ -1.66
LIG1P18858 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.67□□□□□ -1.66
LIG1P18858 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.67□□□□□ -1.66
LIG1P18858 AL512643.1-201ENST00000635735 524 ntBASIC4.67□□□□□ -1.66
LIG1P18858 MIR1244-3-201ENST00000635744 85 ntBASIC4.67□□□□□ -1.66
LIG1P18858 MIR1244-2-201ENST00000636449 85 ntBASIC4.67□□□□□ -1.66
LIG1P18858 MIR1244-4-202ENST00000636813 85 ntBASIC4.67□□□□□ -1.66
LIG1P18858 U6.98-201ENST00000637157 84 ntBASIC4.67□□□□□ -1.66
LIG1P18858 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.67□□□□□ -1.66
LIG1P18858 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LIG1P18858 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LIG1P18858 AC007256.1-201ENST00000392253 2765 ntBASIC4.66□□□□□ -1.66
LIG1P18858 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIG1P18858 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIG1P18858 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.66□□□□□ -1.66
LIG1P18858 Y_RNA.785-201ENST00000384290 109 ntBASIC4.66□□□□□ -1.66
LIG1P18858 SNORA70C-201ENST00000384538 135 ntBASIC4.66□□□□□ -1.66
LIG1P18858 TOMM22P1-201ENST00000418578 312 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AC007098.1-201ENST00000420122 367 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.66□□□□□ -1.66
LIG1P18858 EIF4EP2-201ENST00000422816 654 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.66□□□□□ -1.66
LIG1P18858 AL358472.1-201ENST00000431295 329 ntBASIC4.66□□□□□ -1.66
LIG1P18858 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.66□□□□□ -1.66
LIG1P18858 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.66□□□□□ -1.66
LIG1P18858 AC006011.1-201ENST00000442758 349 ntBASIC4.66□□□□□ -1.66
LIG1P18858 TRBVB-201ENST00000477100 408 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AC110792.1-201ENST00000491826 472 ntBASIC4.66□□□□□ -1.66
LIG1P18858 RNU6-397P-201ENST00000516226 104 ntBASIC4.66□□□□□ -1.66
LIG1P18858 RNU6-143P-201ENST00000516942 93 ntBASIC4.66□□□□□ -1.66
LIG1P18858 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.66□□□□□ -1.66
LIG1P18858 AC034114.1-201ENST00000520293 285 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AP003730.1-201ENST00000524605 285 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.66□□□□□ -1.66
LIG1P18858 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.66□□□□□ -1.66
LIG1P18858 AL121603.1-201ENST00000553815 142 ntBASIC4.66□□□□□ -1.66
LIG1P18858 AL157871.3-201ENST00000557231 293 ntBASIC4.66□□□□□ -1.66
LIG1P18858 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.66□□□□□ -1.66
LIG1P18858 AC107294.1-201ENST00000609524 467 ntBASIC4.66□□□□□ -1.66
LIG1P18858 FAM27D1-201ENST00000612308 341 ntBASIC4.66□□□□□ -1.66
LIG1P18858 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
LIG1P18858 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.66□□□□□ -1.66
LIG1P18858 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LIG1P18858 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LIG1P18858 SDAD1P2-201ENST00000441308 2028 ntBASIC4.65□□□□□ -1.66
LIG1P18858 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LIG1P18858 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LIG1P18858 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.65□□□□□ -1.66
LIG1P18858 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.65□□□□□ -1.66
LIG1P18858 RPL9P7-201ENST00000330965 580 ntBASIC4.65□□□□□ -1.67
LIG1P18858 Y_RNA.20-201ENST00000362479 113 ntBASIC4.65□□□□□ -1.67
LIG1P18858 Y_RNA.183-201ENST00000363882 113 ntBASIC4.65□□□□□ -1.67
LIG1P18858 RNU6-595P-201ENST00000363944 107 ntBASIC4.65□□□□□ -1.67
LIG1P18858 RNU6-395P-201ENST00000365662 106 ntBASIC4.65□□□□□ -1.67
LIG1P18858 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIG1P18858 Y_RNA.471-201ENST00000384312 102 ntBASIC4.65□□□□□ -1.67
LIG1P18858 SNORA69.1-201ENST00000390904 137 ntBASIC4.65□□□□□ -1.67
LIG1P18858 RPS26P8-201ENST00000393490 348 ntBASIC4.65□□□□□ -1.67
LIG1P18858 AL513043.1-201ENST00000439124 535 ntBASIC4.65□□□□□ -1.67
LIG1P18858 AL359073.1-201ENST00000448036 403 ntBASIC4.65□□□□□ -1.67
LIG1P18858 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.65□□□□□ -1.67
LIG1P18858 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.65□□□□□ -1.67
LIG1P18858 RPL9P9-202ENST00000466501 579 ntBASIC4.65□□□□□ -1.67
LIG1P18858 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.65□□□□□ -1.67
LIG1P18858 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.65□□□□□ -1.67
LIG1P18858 HSPE1P6-201ENST00000479457 291 ntBASIC4.65□□□□□ -1.67
LIG1P18858 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.65□□□□□ -1.67
LIG1P18858 RNU6-138P-201ENST00000515952 107 ntBASIC4.65□□□□□ -1.67
LIG1P18858 RN7SKP289-201ENST00000517244 295 ntBASIC4.65□□□□□ -1.67
LIG1P18858 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.65□□□□□ -1.67
LIG1P18858 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.65□□□□□ -1.67
LIG1P18858 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIG1P18858 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIG1P18858 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LIG1P18858 FAM35DP-201ENST00000323387 2712 ntBASIC4.65□□□□□ -1.67
LIG1P18858 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.65□□□□□ -1.67
LIG1P18858 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIG1P18858 RNU6-1317P-201ENST00000364582 104 ntBASIC4.64□□□□□ -1.67
LIG1P18858 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.64□□□□□ -1.67
LIG1P18858 AL159169.1-201ENST00000421119 127 ntBASIC4.64□□□□□ -1.67
LIG1P18858 AC004975.1-201ENST00000428733 208 ntBASIC4.64□□□□□ -1.67
LIG1P18858 AC092573.2-201ENST00000434546 243 ntBASIC4.64□□□□□ -1.67
LIG1P18858 AL356535.1-201ENST00000440335 398 ntBASIC4.64□□□□□ -1.67
LIG1P18858 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
LIG1P18858 Y_RNA.700-201ENST00000516806 100 ntBASIC4.64□□□□□ -1.67
LIG1P18858 RNU6-570P-201ENST00000517051 105 ntBASIC4.64□□□□□ -1.67
LIG1P18858 RNU6-111P-201ENST00000517179 105 ntBASIC4.64□□□□□ -1.67
LIG1P18858 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.64□□□□□ -1.67
LIG1P18858 SYF2P1-201ENST00000550658 413 ntBASIC4.64□□□□□ -1.67
LIG1P18858 GNRHR2P1-201ENST00000555315 631 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms