Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 HMGB1P9-201ENST00000429856 646 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 RPS3AP52-201ENST00000435639 297 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AL359672.1-201ENST00000442302 409 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 Y_RNA.632-201ENST00000459189 102 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 RNU7-138P-201ENST00000459479 64 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 SNORA31.19-201ENST00000517079 126 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC093331.1-201ENST00000521474 169 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC025423.5-201ENST00000550230 219 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC007151.1-201ENST00000572774 483 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 MIR4738-201ENST00000579134 87 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 APOOP1-201ENST00000604695 592 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC016727.1-205ENST00000605437 569 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AL355365.1-201ENST00000616480 294 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC090574.1-201ENST00000623186 233 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 AC119674.1-207ENST00000641355 633 ntBASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
TMIGD3P0DMS9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
TMIGD3P0DMS9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.28□□□□□ -1.89
TMIGD3P0DMS9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 SNORD14B-201ENST00000364533 90 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 Y_RNA.460-201ENST00000384255 102 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 MIR34B-201ENST00000385076 84 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 AL360182.1-201ENST00000397433 468 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RN7SKP158-201ENST00000410453 326 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RNU4-14P-201ENST00000410858 122 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RPL37P10-201ENST00000412884 288 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RPL7P37-201ENST00000425095 738 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 AC007560.1-201ENST00000426912 237 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 BRK1P2-201ENST00000442875 223 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 HMGN1P13-201ENST00000505795 138 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RPL39P5-202ENST00000512505 151 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RN7SKP24-201ENST00000515888 284 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 MIR3200-201ENST00000580767 85 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 RNU6-85P-201ENST00000605989 107 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 MFSD8-236ENST00000641509 4050 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMIGD3P0DMS9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AL079305.1-201ENST00000623159 3008 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC022336.2-201ENST00000568966 2538 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 FRG1CP-201ENST00000358464 769 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AL627311.1-201ENST00000431514 115 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 SNAP23P1-201ENST00000433229 246 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 RPS27P27-201ENST00000498779 255 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 RNU6-559P-201ENST00000516151 98 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 RNU6-572P-201ENST00000516724 80 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AP005597.4-201ENST00000526762 229 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 FRG2DP-202ENST00000566967 323 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC044792.1-201ENST00000593294 196 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AL359757.2-201ENST00000624309 274 ntBASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.26□□□□□ -1.89
TMIGD3P0DMS9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 AC093908.1-201ENST00000623125 8092 ntBASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 Y_RNA.419-201ENST00000384041 102 ntBASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 RNU6-214P-201ENST00000384130 107 ntBASIC3.25□□□□□ -1.89
TMIGD3P0DMS9 RNU6-166P-201ENST00000384371 107 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms