Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AP001804.3-201ENST00000525146 880 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AL137161.1-201ENST00000532231 390 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MMP3P08254 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP3P08254 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.21□□□□□ -1.9
MMP3P08254 MIR3945-201ENST00000581853 98 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AC018638.8-201ENST00000588755 281 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AL138889.2-201ENST00000603883 242 ntBASIC3.21□□□□□ -1.9
MMP3P08254 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
MMP3P08254 IGHVIII-44-202ENST00000636235 289 ntBASIC3.21□□□□□ -1.9
MMP3P08254 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MMP3P08254 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MMP3P08254 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.9
MMP3P08254 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MMP3P08254 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP3P08254 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MMP3P08254 Y_RNA.157-201ENST00000363638 102 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RNU6-522P-201ENST00000364497 107 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RNU6-715P-201ENST00000365204 103 ntBASIC3.2□□□□□ -1.9
MMP3P08254 SNORA4.3-201ENST00000365564 137 ntBASIC3.2□□□□□ -1.9
MMP3P08254 MIR1290-201ENST00000408735 78 ntBASIC3.2□□□□□ -1.9
MMP3P08254 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
MMP3P08254 RNA5SP118-201ENST00000410385 109 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RNU6-373P-201ENST00000411247 98 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC245291.1-201ENST00000419501 328 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC063976.3-201ENST00000426849 329 ntBASIC3.2□□□□□ -1.9
MMP3P08254 SRIP2-201ENST00000428470 166 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AL356867.1-201ENST00000429623 299 ntBASIC3.2□□□□□ -1.9
MMP3P08254 TAAR7P-201ENST00000436141 242 ntBASIC3.2□□□□□ -1.9
MMP3P08254 NDUFB4P6-201ENST00000436819 366 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC098614.3-201ENST00000438957 440 ntBASIC3.2□□□□□ -1.9
MMP3P08254 SNRPEP8-201ENST00000442866 260 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP3P08254 AP002884.2-201ENST00000471647 395 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RPS20P22-201ENST00000473700 357 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RPL21P93-201ENST00000480465 489 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC083904.1-201ENST00000487828 231 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP3P08254 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP3P08254 TBCAP3-201ENST00000512475 312 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC112206.3-201ENST00000514578 389 ntBASIC3.2□□□□□ -1.9
MMP3P08254 RPL7P20-201ENST00000520308 745 ntBASIC3.2□□□□□ -1.9
MMP3P08254 CASP1P1-201ENST00000526345 212 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.2□□□□□ -1.9
MMP3P08254 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP3P08254 MIR4474-201ENST00000579189 78 ntBASIC3.2□□□□□ -1.9
MMP3P08254 CTHRC1P1-201ENST00000605383 469 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.2□□□□□ -1.9
MMP3P08254 AC092807.2-201ENST00000609367 243 ntBASIC3.2□□□□□ -1.9
MMP3P08254 AP003400.5-201ENST00000624827 617 ntBASIC3.2□□□□□ -1.9
MMP3P08254 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MMP3P08254 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
MMP3P08254 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
MMP3P08254 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.2□□□□□ -1.9
MMP3P08254 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
MMP3P08254 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
MMP3P08254 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MMP3P08254 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP3P08254 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
MMP3P08254 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MMP3P08254 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP3P08254 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MMP3P08254 Y_RNA.279-201ENST00000364763 95 ntBASIC3.19□□□□□ -1.9
MMP3P08254 Y_RNA.534-201ENST00000384599 112 ntBASIC3.19□□□□□ -1.9
MMP3P08254 SNORD70.1-201ENST00000391007 85 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AL445529.1-201ENST00000398713 389 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RPS4XP7-201ENST00000406274 780 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RNU2-33P-201ENST00000410344 192 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC080125.1-201ENST00000414888 684 ntBASIC3.19□□□□□ -1.9
MMP3P08254 OOSP1P1-201ENST00000423265 274 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AL513185.2-201ENST00000425543 193 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC009237.8-201ENST00000445492 379 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RPL37P6-201ENST00000460682 294 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC087588.1-201ENST00000462203 316 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RPS23P3-201ENST00000470993 430 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC114781.4-201ENST00000513707 639 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RNA5SP290-201ENST00000517133 127 ntBASIC3.19□□□□□ -1.9
MMP3P08254 RNU6-1314P-201ENST00000517139 104 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.19□□□□□ -1.9
MMP3P08254 AC104984.5-201ENST00000586878 94 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC011712.1-201ENST00000588959 234 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC174048.1-201ENST00000603389 144 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC104260.1-201ENST00000616660 539 ntBASIC3.19□□□□□ -1.9
MMP3P08254 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.19□□□□□ -1.9
MMP3P08254 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.18□□□□□ -1.9
MMP3P08254 MTND4P12-201ENST00000498999 1377 ntBASIC3.18□□□□□ -1.9
MMP3P08254 CBX3P1-201ENST00000325243 554 ntBASIC3.18□□□□□ -1.9
MMP3P08254 RNU4-82P-201ENST00000362443 140 ntBASIC3.18□□□□□ -1.9
MMP3P08254 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
MMP3P08254 RNU6-1303P-201ENST00000364841 107 ntBASIC3.18□□□□□ -1.9
MMP3P08254 SNORA16.2-201ENST00000390991 127 ntBASIC3.18□□□□□ -1.9
MMP3P08254 RNU6-1197P-201ENST00000391183 107 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AL360182.1-201ENST00000397433 468 ntBASIC3.18□□□□□ -1.9
MMP3P08254 AL592114.1-201ENST00000403842 483 ntBASIC3.18□□□□□ -1.9
MMP3P08254 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.18□□□□□ -1.9
MMP3P08254 RNU4-26P-201ENST00000410270 107 ntBASIC3.18□□□□□ -1.9
MMP3P08254 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms