Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 Y_RNA.576-201ENST00000384781 102 ntBASIC2.72□□□□□ -1.97
VTNP04004 RNU6-817P-201ENST00000391083 104 ntBASIC2.72□□□□□ -1.97
VTNP04004 CISD1P1-201ENST00000393907 327 ntBASIC2.72□□□□□ -1.97
VTNP04004 AL359511.1-201ENST00000402970 211 ntBASIC2.72□□□□□ -1.97
VTNP04004 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
VTNP04004 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.72□□□□□ -1.97
VTNP04004 AC099548.1-201ENST00000421443 426 ntBASIC2.72□□□□□ -1.97
VTNP04004 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.72□□□□□ -1.97
VTNP04004 ELOCP14-201ENST00000428070 331 ntBASIC2.72□□□□□ -1.97
VTNP04004 GPM6BP2-201ENST00000432046 144 ntBASIC2.72□□□□□ -1.97
VTNP04004 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.72□□□□□ -1.97
VTNP04004 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.72□□□□□ -1.97
VTNP04004 ELOCP7-201ENST00000439968 331 ntBASIC2.72□□□□□ -1.97
VTNP04004 GPM6BP1-201ENST00000446387 144 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VTNP04004 AC093392.2-201ENST00000450682 337 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC091179.1-201ENST00000461606 579 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC087588.1-201ENST00000462203 316 ntBASIC2.72□□□□□ -1.97
VTNP04004 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
VTNP04004 RPL39P36-201ENST00000490784 156 ntBASIC2.72□□□□□ -1.97
VTNP04004 RNA5SP503-201ENST00000517047 117 ntBASIC2.72□□□□□ -1.97
VTNP04004 RANP3-201ENST00000530970 276 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.72□□□□□ -1.97
VTNP04004 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.72□□□□□ -1.97
VTNP04004 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.72□□□□□ -1.97
VTNP04004 AC008752.3-201ENST00000588113 712 ntBASIC2.72□□□□□ -1.97
VTNP04004 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.72□□□□□ -1.97
VTNP04004 AL161798.1-201ENST00000604630 131 ntBASIC2.72□□□□□ -1.97
VTNP04004 AL627309.6-201ENST00000606857 840 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC012409.4-201ENST00000612923 249 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC073308.1-201ENST00000623696 305 ntBASIC2.72□□□□□ -1.97
VTNP04004 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.72□□□□□ -1.97
VTNP04004 AL512643.1-201ENST00000635735 524 ntBASIC2.72□□□□□ -1.97
VTNP04004 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.72□□□□□ -1.97
VTNP04004 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VTNP04004 AL137003.2-201ENST00000606924 2538 ntBASIC2.72□□□□□ -1.97
VTNP04004 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VTNP04004 MTND5P17-201ENST00000418405 1603 ntBASIC2.71□□□□□ -1.97
VTNP04004 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VTNP04004 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VTNP04004 SNORD115-7-201ENST00000365306 82 ntBASIC2.71□□□□□ -1.98
VTNP04004 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
VTNP04004 RNU6-1029P-201ENST00000384109 107 ntBASIC2.71□□□□□ -1.98
VTNP04004 RNU6-217P-201ENST00000384164 104 ntBASIC2.71□□□□□ -1.98
VTNP04004 RNU6-140P-201ENST00000384566 108 ntBASIC2.71□□□□□ -1.98
VTNP04004 MIR181A1-201ENST00000385026 110 ntBASIC2.71□□□□□ -1.98
VTNP04004 SNORD115-47-201ENST00000391226 86 ntBASIC2.71□□□□□ -1.98
VTNP04004 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.71□□□□□ -1.98
VTNP04004 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.71□□□□□ -1.98
VTNP04004 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 MTCYBP8-201ENST00000422855 651 ntBASIC2.71□□□□□ -1.98
VTNP04004 RPL36AP6-201ENST00000435770 321 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC092473.1-201ENST00000441098 221 ntBASIC2.71□□□□□ -1.98
VTNP04004 RPL12P25-201ENST00000455592 494 ntBASIC2.71□□□□□ -1.98
VTNP04004 RN7SL499P-201ENST00000481141 276 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC092989.1-201ENST00000481235 277 ntBASIC2.71□□□□□ -1.98
VTNP04004 RPS15AP34-201ENST00000487776 387 ntBASIC2.71□□□□□ -1.98
VTNP04004 ANXA2P1-201ENST00000505539 926 ntBASIC2.71□□□□□ -1.98
VTNP04004 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.71□□□□□ -1.98
VTNP04004 ARL4AP2-201ENST00000507378 601 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 RNA5SP24-201ENST00000516478 95 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC007536.1-201ENST00000533382 349 ntBASIC2.71□□□□□ -1.98
VTNP04004 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.71□□□□□ -1.98
VTNP04004 ZNF519P2-201ENST00000557032 169 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.71□□□□□ -1.98
VTNP04004 TPRKBP2-201ENST00000565969 475 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC025678.1-201ENST00000567861 338 ntBASIC2.71□□□□□ -1.98
VTNP04004 MIR4775-201ENST00000581168 75 ntBASIC2.71□□□□□ -1.98
VTNP04004 MTATP6P3-201ENST00000581686 676 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC017083.3-201ENST00000609955 700 ntBASIC2.71□□□□□ -1.98
VTNP04004 AL359547.2-201ENST00000615810 418 ntBASIC2.71□□□□□ -1.98
VTNP04004 AC011155.2-201ENST00000623202 216 ntBASIC2.71□□□□□ -1.98
VTNP04004 Z99571.1-201ENST00000636677 394 ntBASIC2.71□□□□□ -1.98
VTNP04004 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
VTNP04004 CKAP2P1-201ENST00000555477 2049 ntBASIC2.71□□□□□ -1.98
VTNP04004 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
VTNP04004 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VTNP04004 RNU6-1090P-201ENST00000364065 94 ntBASIC2.7□□□□□ -1.98
VTNP04004 RNU6-483P-201ENST00000384088 108 ntBASIC2.7□□□□□ -1.98
VTNP04004 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VTNP04004 RNU6-1158P-201ENST00000391167 107 ntBASIC2.7□□□□□ -1.98
VTNP04004 SNORA3.2-201ENST00000408221 125 ntBASIC2.7□□□□□ -1.98
VTNP04004 RN7SKP284-201ENST00000411002 343 ntBASIC2.7□□□□□ -1.98
VTNP04004 TIMM9P3-201ENST00000428659 274 ntBASIC2.7□□□□□ -1.98
VTNP04004 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.7□□□□□ -1.98
VTNP04004 MTND3P21-201ENST00000433774 331 ntBASIC2.7□□□□□ -1.98
VTNP04004 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.7□□□□□ -1.98
VTNP04004 AL714022.1-201ENST00000439897 151 ntBASIC2.7□□□□□ -1.98
VTNP04004 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
VTNP04004 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
VTNP04004 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.7□□□□□ -1.98
VTNP04004 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
VTNP04004 AC019235.1-201ENST00000503847 207 ntBASIC2.7□□□□□ -1.98
VTNP04004 AC234781.5-201ENST00000508429 271 ntBASIC2.7□□□□□ -1.98
VTNP04004 SNORD27.1-201ENST00000516319 72 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms