Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
APOEP02649 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
APOEP02649 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.43□□□□□ -2.18
APOEP02649 UBE2D3P3-201ENST00000426992 425 ntBASIC1.43□□□□□ -2.18
APOEP02649 SDAD1P3-201ENST00000427380 333 ntBASIC1.43□□□□□ -2.18
APOEP02649 RPL17P35-201ENST00000432217 549 ntBASIC1.43□□□□□ -2.18
APOEP02649 AL603825.1-201ENST00000438481 80 ntBASIC1.43□□□□□ -2.18
APOEP02649 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.43□□□□□ -2.18
APOEP02649 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC1.43□□□□□ -2.18
APOEP02649 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.43□□□□□ -2.18
APOEP02649 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 RNU6-150P-201ENST00000516237 95 ntBASIC1.43□□□□□ -2.18
APOEP02649 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 AC023813.2-201ENST00000564321 469 ntBASIC1.43□□□□□ -2.18
APOEP02649 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
APOEP02649 AC069545.1-201ENST00000605671 358 ntBASIC1.43□□□□□ -2.18
APOEP02649 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.43□□□□□ -2.18
APOEP02649 AL359314.1-201ENST00000616913 261 ntBASIC1.43□□□□□ -2.18
APOEP02649 MIR6134-201ENST00000617606 109 ntBASIC1.43□□□□□ -2.18
APOEP02649 AC008121.3-201ENST00000618726 433 ntBASIC1.43□□□□□ -2.18
APOEP02649 AC093875.1-201ENST00000623688 504 ntBASIC1.43□□□□□ -2.18
APOEP02649 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
APOEP02649 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.43□□□□□ -2.18
APOEP02649 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.42□□□□□ -2.18
APOEP02649 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
APOEP02649 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOEP02649 RNU6-744P-201ENST00000365557 107 ntBASIC1.42□□□□□ -2.18
APOEP02649 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
APOEP02649 RNU6-1316P-201ENST00000384242 108 ntBASIC1.42□□□□□ -2.18
APOEP02649 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
APOEP02649 FGF7P8-201ENST00000402994 292 ntBASIC1.42□□□□□ -2.18
APOEP02649 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.42□□□□□ -2.18
APOEP02649 MRPS36P1-201ENST00000421291 307 ntBASIC1.42□□□□□ -2.18
APOEP02649 MTCYBP42-201ENST00000444653 1130 ntBASIC1.42□□□□□ -2.18
APOEP02649 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.42□□□□□ -2.18
APOEP02649 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.42□□□□□ -2.18
APOEP02649 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
APOEP02649 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
APOEP02649 RPL37P6-201ENST00000460682 294 ntBASIC1.42□□□□□ -2.18
APOEP02649 AC098862.1-201ENST00000504991 413 ntBASIC1.42□□□□□ -2.18
APOEP02649 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.42□□□□□ -2.18
APOEP02649 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.42□□□□□ -2.18
APOEP02649 AC093012.1-202ENST00000549403 582 ntBASIC1.42□□□□□ -2.18
APOEP02649 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.42□□□□□ -2.18
APOEP02649 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.42□□□□□ -2.18
APOEP02649 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.42□□□□□ -2.18
APOEP02649 AC023158.2-201ENST00000614876 543 ntBASIC1.42□□□□□ -2.18
APOEP02649 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.42□□□□□ -2.18
APOEP02649 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.42□□□□□ -2.18
APOEP02649 AC092447.10-201ENST00000620607 1652 ntBASIC1.42□□□□□ -2.18
APOEP02649 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
APOEP02649 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.41□□□□□ -2.18
APOEP02649 MTCYBP35-201ENST00000503630 1137 ntBASIC1.41□□□□□ -2.18
APOEP02649 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.41□□□□□ -2.18
APOEP02649 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.41□□□□□ -2.18
APOEP02649 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.41□□□□□ -2.18
APOEP02649 AC027338.1-201ENST00000514840 825 ntBASIC1.41□□□□□ -2.18
APOEP02649 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.41□□□□□ -2.18
APOEP02649 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.41□□□□□ -2.18
APOEP02649 SUB1P3-201ENST00000564581 315 ntBASIC1.41□□□□□ -2.18
APOEP02649 MIR3912-201ENST00000577566 105 ntBASIC1.41□□□□□ -2.18
APOEP02649 AC005776.1-201ENST00000603164 290 ntBASIC1.41□□□□□ -2.18
APOEP02649 AC087045.1-201ENST00000605856 382 ntBASIC1.41□□□□□ -2.18
APOEP02649 snoU13.31-201ENST00000607291 104 ntBASIC1.41□□□□□ -2.18
APOEP02649 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
APOEP02649 RNU6-898P-201ENST00000365627 104 ntBASIC1.4□□□□□ -2.19
APOEP02649 MIR597-201ENST00000384968 97 ntBASIC1.4□□□□□ -2.19
APOEP02649 MIR1262-201ENST00000408276 93 ntBASIC1.4□□□□□ -2.19
APOEP02649 Y_RNA.595-201ENST00000410403 105 ntBASIC1.4□□□□□ -2.19
APOEP02649 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.4□□□□□ -2.19
APOEP02649 EIF4EP2-201ENST00000422816 654 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC104651.1-201ENST00000427559 735 ntBASIC1.4□□□□□ -2.19
APOEP02649 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.4□□□□□ -2.19
APOEP02649 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.4□□□□□ -2.19
APOEP02649 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.4□□□□□ -2.19
APOEP02649 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.4□□□□□ -2.19
APOEP02649 FCF1P6-201ENST00000456841 595 ntBASIC1.4□□□□□ -2.19
APOEP02649 Y_RNA.638-201ENST00000459374 113 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC104563.1-201ENST00000476147 376 ntBASIC1.4□□□□□ -2.19
APOEP02649 AL163540.1-201ENST00000485382 386 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.4□□□□□ -2.19
APOEP02649 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.4□□□□□ -2.19
APOEP02649 AP005660.1-201ENST00000522972 293 ntBASIC1.4□□□□□ -2.19
APOEP02649 AP005597.4-201ENST00000526762 229 ntBASIC1.4□□□□□ -2.19
APOEP02649 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.4□□□□□ -2.19
APOEP02649 AL133153.1-201ENST00000557756 303 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.4□□□□□ -2.19
APOEP02649 AC021646.1-201ENST00000605469 484 ntBASIC1.4□□□□□ -2.19
APOEP02649 PRR13P7-201ENST00000605538 430 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC107952.2-201ENST00000606048 486 ntBASIC1.4□□□□□ -2.19
APOEP02649 AC013470.4-201ENST00000619978 986 ntBASIC1.4□□□□□ -2.19
APOEP02649 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.4□□□□□ -2.19
APOEP02649 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.4□□□□□ -2.19
APOEP02649 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
APOEP02649 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
APOEP02649 RNU6-289P-201ENST00000364093 107 ntBASIC1.39□□□□□ -2.19
APOEP02649 RNU4-51P-201ENST00000364206 140 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms