Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
COL1A1P02452 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
COL1A1P02452 RNU6-1066P-201ENST00000363573 105 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 RNU6-650P-201ENST00000365658 111 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 MIR561-201ENST00000385216 97 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AL109755.1-201ENST00000401791 649 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AL133264.1-201ENST00000407157 562 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.11□□□□□ -2.23
COL1A1P02452 SFR1P2-201ENST00000421841 730 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AL160275.3-201ENST00000423876 471 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC008850.1-201ENST00000427546 362 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.11□□□□□ -2.23
COL1A1P02452 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.11□□□□□ -2.23
COL1A1P02452 AC108729.2-201ENST00000476543 840 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AL132857.1-201ENST00000555180 708 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.11□□□□□ -2.23
COL1A1P02452 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.11□□□□□ -2.23
COL1A1P02452 AP003973.1-201ENST00000604639 691 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 AC022202.1-201ENST00000613515 211 ntBASIC1.11□□□□□ -2.23
COL1A1P02452 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL1A1P02452 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL1A1P02452 AL589743.1-201ENST00000551932 2712 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 MTND5P9-201ENST00000503854 1755 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 MIR518A2-201ENST00000384966 87 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 RNU2-28P-201ENST00000410457 189 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 NDUFS5P4-201ENST00000412983 318 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 BTF3P8-201ENST00000414577 526 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AC004941.2-201ENST00000427009 228 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.1□□□□□ -2.23
COL1A1P02452 ZFAND6P1-201ENST00000434138 605 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.1□□□□□ -2.23
COL1A1P02452 AC021146.2-201ENST00000504736 556 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 BOLA3P3-201ENST00000505182 232 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 FAM206BP-201ENST00000510179 541 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 SNORD19.2-201ENST00000516978 73 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 SNORA44.1-201ENST00000517031 108 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 DEFB108E-201ENST00000524692 240 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AC233702.2-202ENST00000562547 291 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 MIR3198-2-201ENST00000577868 80 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 BNIP3P24-201ENST00000593398 557 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AC009233.1-201ENST00000616477 371 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.1□□□□□ -2.23
COL1A1P02452 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.1□□□□□ -2.23
COL1A1P02452 AC092192.1-201ENST00000633154 1018 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 MIR4275-201ENST00000636486 87 ntBASIC1.1□□□□□ -2.23
COL1A1P02452 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
COL1A1P02452 HAUS6P2-201ENST00000433254 2404 ntBASIC1.09□□□□□ -2.23
COL1A1P02452 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
COL1A1P02452 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
COL1A1P02452 AL449283.1-202ENST00000418249 604 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 MTCO3P1-205ENST00000422088 832 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
COL1A1P02452 AC007919.1-201ENST00000429380 217 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.09□□□□□ -2.24
COL1A1P02452 AL096803.2-201ENST00000450032 677 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.09□□□□□ -2.24
COL1A1P02452 DUXAP8-207ENST00000456786 622 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 CYP2C59P-201ENST00000457790 269 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 RPL22P13-201ENST00000493291 347 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.09□□□□□ -2.24
COL1A1P02452 RNU6-885P-201ENST00000516607 104 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.09□□□□□ -2.24
COL1A1P02452 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.09□□□□□ -2.24
COL1A1P02452 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.09□□□□□ -2.24
COL1A1P02452 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
COL1A1P02452 AL359212.1-201ENST00000556608 614 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.09□□□□□ -2.24
COL1A1P02452 AC026271.5-201ENST00000577873 130 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 KATNBL1P5-201ENST00000605015 517 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.24
COL1A1P02452 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 AC004009.2-201ENST00000623016 728 ntBASIC1.09□□□□□ -2.24
COL1A1P02452 AL592310.1-201ENST00000414330 671 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 PPP1R11P2-201ENST00000423543 382 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 RSU1P2-202ENST00000437884 485 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 AC118469.1-201ENST00000442943 488 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 VN1R10P-201ENST00000447106 875 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 RPL23AP35-201ENST00000451906 501 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.08□□□□□ -2.24
COL1A1P02452 AC022784.5-201ENST00000522241 437 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.08□□□□□ -2.24
COL1A1P02452 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
COL1A1P02452 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.08□□□□□ -2.24
COL1A1P02452 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL1A1P02452 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.08□□□□□ -2.24
COL1A1P02452 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.08□□□□□ -2.24
COL1A1P02452 OR4H6P-202ENST00000603819 340 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 MIR8087-201ENST00000612745 78 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 AC010487.4-201ENST00000637027 61 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 U6.101-201ENST00000637707 76 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL1A1P02452 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.08□□□□□ -2.24
COL1A1P02452 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
COL1A1P02452 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 RNU6-549P-201ENST00000384433 107 ntBASIC1.07□□□□□ -2.24
COL1A1P02452 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.07□□□□□ -2.24
COL1A1P02452 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.07□□□□□ -2.24
COL1A1P02452 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms