Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CCDC34P1-201ENST00000507441 517 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.76□□□□□ -1.97
CLPTM1O96005 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 RNU6-1038P-201ENST00000516516 104 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 RPPH1-2P-201ENST00000516688 293 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 AL118558.2-201ENST00000556294 238 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 MIR2682-201ENST00000580305 110 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.76□□□□□ -1.97
CLPTM1O96005 AL356575.1-201ENST00000603008 283 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 AL161756.2-201ENST00000604597 246 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CLPTM1O96005 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 Z99571.1-201ENST00000636677 394 ntBASIC2.76□□□□□ -1.97
CLPTM1O96005 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.76□□□□□ -1.97
CLPTM1O96005 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
CLPTM1O96005 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CLPTM1O96005 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLPTM1O96005 Y_RNA.160-201ENST00000363677 92 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 RNU6-741P-201ENST00000383889 107 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MIR514A2-201ENST00000385131 88 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MIR514A3-201ENST00000385132 88 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 RNU6-1197P-201ENST00000391183 107 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.75□□□□□ -1.97
CLPTM1O96005 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLPTM1O96005 RNU2-33P-201ENST00000410344 192 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 EEF1A1P40-201ENST00000412883 573 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.75□□□□□ -1.97
CLPTM1O96005 AC080125.1-201ENST00000414888 684 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.75□□□□□ -1.97
CLPTM1O96005 AL590383.1-201ENST00000428602 75 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 CALM1P1-201ENST00000442082 433 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.75□□□□□ -1.97
CLPTM1O96005 RPL37P6-201ENST00000460682 294 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC087588.1-201ENST00000462203 316 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 RPL38P4-201ENST00000502376 214 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 SUMO2P6-201ENST00000505273 288 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.75□□□□□ -1.97
CLPTM1O96005 RNU6-914P-201ENST00000516749 109 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 RNA5SP290-201ENST00000517133 127 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 SNORA70.24-201ENST00000517233 118 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AF235103.2-201ENST00000525753 346 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 CASP1P1-201ENST00000526345 212 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.75□□□□□ -1.97
CLPTM1O96005 AL121579.1-201ENST00000555129 305 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MIR5195-201ENST00000583555 115 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MIR4424-201ENST00000585257 86 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC174048.1-201ENST00000603389 144 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.75□□□□□ -1.97
CLPTM1O96005 AL137843.1-201ENST00000605078 385 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC090115.4-201ENST00000609970 188 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 uc_338.34-201ENST00000617467 174 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.75□□□□□ -1.97
CLPTM1O96005 AL512643.1-201ENST00000635735 524 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 MTND1P37-201ENST00000636562 264 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 AC100810.6-201ENST00000638068 285 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
CLPTM1O96005 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLPTM1O96005 MTND4P35-201ENST00000604257 1375 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLPTM1O96005 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLPTM1O96005 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AC007785.2-201ENST00000598627 1916 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLPTM1O96005 RNU1-35P-201ENST00000362782 153 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 Y_RNA.231-201ENST00000364358 102 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RNU6-38P-201ENST00000384085 107 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 Y_RNA.534-201ENST00000384599 112 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RNU6-332P-201ENST00000391193 108 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CLPTM1O96005 Y_RNA.615-201ENST00000410769 117 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AC138393.2-201ENST00000414742 246 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AL353678.1-201ENST00000422735 741 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AL160275.3-201ENST00000423876 471 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AL121601.2-201ENST00000438019 707 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 MTCO3P18-201ENST00000440206 761 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RPS24P13-201ENST00000442520 397 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RPS3AP12-201ENST00000443616 753 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 RNU6-333P-201ENST00000459117 107 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RN7SL863P-201ENST00000462370 296 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RPL21P99-201ENST00000480369 423 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.74□□□□□ -1.97
CLPTM1O96005 RPL39P36-201ENST00000490784 156 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.74□□□□□ -1.97
CLPTM1O96005 RN7SKP40-201ENST00000517211 242 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 RN7SKP57-201ENST00000517248 293 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.74□□□□□ -1.97
CLPTM1O96005 BNIP3P6-201ENST00000549284 499 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.74□□□□□ -1.97
CLPTM1O96005 AL138889.2-201ENST00000603883 242 ntBASIC2.74□□□□□ -1.97
CLPTM1O96005 YPEL5P2-201ENST00000605553 359 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms