Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC021171.1-201ENST00000603137 706 ntBASIC0.06□□□□□ -2.4
USH2AO75445 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
USH2AO75445 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.06□□□□□ -2.4
USH2AO75445 MIR676-201ENST00000390702 67 ntBASIC0.06□□□□□ -2.4
USH2AO75445 PIGFP2-201ENST00000421400 651 ntBASIC0.06□□□□□ -2.4
USH2AO75445 BPY2DP-201ENST00000422208 265 ntBASIC0.06□□□□□ -2.4
USH2AO75445 DDX3P2-201ENST00000446138 111 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.06□□□□□ -2.4
USH2AO75445 MTCO2P32-201ENST00000514865 403 ntBASIC0.06□□□□□ -2.4
USH2AO75445 Y_RNA.674-201ENST00000516362 113 ntBASIC0.06□□□□□ -2.4
USH2AO75445 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.06□□□□□ -2.4
USH2AO75445 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC087821.2-201ENST00000637086 450 ntBASIC0.06□□□□□ -2.4
USH2AO75445 AC134026.1-201ENST00000623249 2239 ntBASIC0.06□□□□□ -2.4
USH2AO75445 CYP2C59P-201ENST00000457790 269 ntBASIC0.05□□□□□ -2.4
USH2AO75445 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.05□□□□□ -2.4
USH2AO75445 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.05□□□□□ -2.4
USH2AO75445 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.05□□□□□ -2.4
USH2AO75445 AC106791.2-201ENST00000604680 391 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AC008759.3-201ENST00000613300 508 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AC022202.1-201ENST00000613515 211 ntBASIC0.05□□□□□ -2.4
USH2AO75445 RNA5SP214-201ENST00000363378 118 ntBASIC0.05□□□□□ -2.4
USH2AO75445 MTCO2P8-201ENST00000412213 658 ntBASIC0.05□□□□□ -2.4
USH2AO75445 SFR1P2-201ENST00000421841 730 ntBASIC0.05□□□□□ -2.4
USH2AO75445 EIF4EP4-201ENST00000424916 578 ntBASIC0.05□□□□□ -2.4
USH2AO75445 VPS26AP1-201ENST00000483197 979 ntBASIC0.05□□□□□ -2.4
USH2AO75445 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
USH2AO75445 RNU6-322P-201ENST00000516010 103 ntBASIC0.05□□□□□ -2.4
USH2AO75445 MIR3616-201ENST00000584070 92 ntBASIC0.05□□□□□ -2.4
USH2AO75445 VN1R82P-201ENST00000601481 356 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AC073349.3-201ENST00000617616 186 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AC110079.1-202ENST00000635213 138 ntBASIC0.05□□□□□ -2.4
USH2AO75445 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.05□□□□□ -2.4
USH2AO75445 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
USH2AO75445 RNU6-50P-201ENST00000362356 103 ntBASIC0.05□□□□□ -2.4
USH2AO75445 RNU4-48P-201ENST00000365559 182 ntBASIC0.05□□□□□ -2.4
USH2AO75445 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.05□□□□□ -2.4
USH2AO75445 AL359704.1-201ENST00000411586 781 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AP005902.1-201ENST00000521358 186 ntBASIC0.05□□□□□ -2.4
USH2AO75445 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.05□□□□□ -2.4
USH2AO75445 AL356585.4-201ENST00000623078 1229 ntBASIC0.05□□□□□ -2.4
USH2AO75445 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 RPS15AP10-201ENST00000432472 382 ntBASIC0.04□□□□□ -2.4
USH2AO75445 MTND4P19-201ENST00000446659 478 ntBASIC0.04□□□□□ -2.4
USH2AO75445 RNA5SP180-201ENST00000516181 101 ntBASIC0.04□□□□□ -2.4
USH2AO75445 HMGB1P46-201ENST00000520062 610 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC107953.1-201ENST00000522216 297 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC018659.1-201ENST00000551083 169 ntBASIC0.04□□□□□ -2.4
USH2AO75445 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 NUTF2P8-201ENST00000604593 363 ntBASIC0.04□□□□□ -2.4
USH2AO75445 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
USH2AO75445 MIR126-201ENST00000362291 85 ntBASIC0.04□□□□□ -2.4
USH2AO75445 Y_RNA.78-201ENST00000362970 110 ntBASIC0.04□□□□□ -2.4
USH2AO75445 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.04□□□□□ -2.4
USH2AO75445 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC245047.4-201ENST00000433189 144 ntBASIC0.04□□□□□ -2.4
USH2AO75445 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.04□□□□□ -2.4
USH2AO75445 ANKRD26P4-201ENST00000455755 950 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC114982.1-201ENST00000469402 321 ntBASIC0.04□□□□□ -2.4
USH2AO75445 RNU1-61P-201ENST00000516107 151 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 MIR3937-201ENST00000580135 106 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL450336.1-201ENST00000605180 586 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL662814.1-201ENST00000617364 121 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 AL117342.1-201ENST00000404861 406 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC092393.1-201ENST00000439625 742 ntBASIC0.04□□□□□ -2.4
USH2AO75445 MTCO3P45-201ENST00000443036 613 ntBASIC0.04□□□□□ -2.4
USH2AO75445 TRGVB-201ENST00000453257 471 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL049830.1-201ENST00000468034 425 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC010301.1-201ENST00000473936 355 ntBASIC0.04□□□□□ -2.4
USH2AO75445 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC007751.1-201ENST00000529260 376 ntBASIC0.04□□□□□ -2.4
USH2AO75445 BNIP3P25-201ENST00000596023 559 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC069114.2-201ENST00000604699 304 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL773524.1-201ENST00000614065 229 ntBASIC0.04□□□□□ -2.4
USH2AO75445 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.04□□□□□ -2.4
USH2AO75445 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
USH2AO75445 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
USH2AO75445 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
USH2AO75445 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.04□□□□□ -2.4
USH2AO75445 SNORA16.2-201ENST00000390991 127 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.04□□□□□ -2.4
USH2AO75445 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.04□□□□□ -2.4
USH2AO75445 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.04□□□□□ -2.4
USH2AO75445 AC023442.1-201ENST00000531247 422 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AL121992.2-201ENST00000606262 256 ntBASIC0.04□□□□□ -2.4
USH2AO75445 AC040896.1-201ENST00000613819 479 ntBASIC0.04□□□□□ -2.4
USH2AO75445 RPL37P10-201ENST00000412884 288 ntBASIC0.03□□□□□ -2.4
USH2AO75445 ZFAND6P1-201ENST00000434138 605 ntBASIC0.03□□□□□ -2.4
USH2AO75445 ELOCP10-201ENST00000440624 327 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNFT1P2-201ENST00000443064 757 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AL589880.1-201ENST00000448271 287 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC022493.2-201ENST00000506122 481 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RN7SKP12-201ENST00000516275 143 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNA5SP291-201ENST00000517222 105 ntBASIC0.03□□□□□ -2.4
USH2AO75445 ELOCP34-201ENST00000604436 327 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AL021997.1-201ENST00000605757 193 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms