Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 FO393415.2-201ENST00000480085 343 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC140059.1-201ENST00000489238 361 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC093752.1-206ENST00000511823 336 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.68□□□□□ -2.14
SHOX2O60902 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.68□□□□□ -2.14
SHOX2O60902 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHOX2O60902 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.68□□□□□ -2.14
SHOX2O60902 DPPA3P3-201ENST00000603842 430 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC245297.2-201ENST00000610119 565 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC109809.1-201ENST00000619665 545 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHOX2O60902 CDC27P3-201ENST00000635418 1910 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.67□□□□□ -2.14
SHOX2O60902 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SHOX2O60902 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SHOX2O60902 Y_RNA.191-201ENST00000363972 113 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 RNU6-342P-201ENST00000384521 104 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 MIR95-201ENST00000385072 81 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SHOX2O60902 U8.14-201ENST00000390843 143 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 SNORA40.19-201ENST00000390846 128 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 MIR1294-201ENST00000408503 142 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 MTCO1P17-201ENST00000411522 491 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC096920.1-201ENST00000423991 241 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC005094.1-201ENST00000440420 368 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AL161788.1-201ENST00000441805 169 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 ZNF886P-201ENST00000450781 723 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.67□□□□□ -2.14
SHOX2O60902 FABP5P13-201ENST00000452144 328 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC092001.1-201ENST00000453012 261 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC016550.1-201ENST00000505348 785 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 MTND2P31-201ENST00000512602 616 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 SNORA31.3-201ENST00000516029 96 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.67□□□□□ -2.14
SHOX2O60902 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.67□□□□□ -2.14
SHOX2O60902 AC022880.1-201ENST00000534017 973 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.67□□□□□ -2.14
SHOX2O60902 AC092451.2-201ENST00000538746 658 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC079598.5-201ENST00000547460 117 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.67□□□□□ -2.14
SHOX2O60902 RPL21P136-201ENST00000605378 396 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AL158211.2-201ENST00000607282 395 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 AL133445.2-201ENST00000611191 527 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.67□□□□□ -2.14
SHOX2O60902 MIR6734-201ENST00000621166 68 ntBASIC1.67□□□□□ -2.14
SHOX2O60902 RNU6-512P-201ENST00000364438 103 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 MIR625-201ENST00000385047 85 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 HMGN2P39-201ENST00000398005 273 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 RPL23AP39-201ENST00000415533 405 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 CYCSP49-201ENST00000420810 319 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.66□□□□□ -2.14
SHOX2O60902 AL645568.3-201ENST00000433683 316 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AL353706.1-201ENST00000436728 494 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.66□□□□□ -2.14
SHOX2O60902 AP000542.1-201ENST00000448473 371 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 OR6C5P-201ENST00000452388 923 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AL137159.1-201ENST00000452808 512 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.66□□□□□ -2.14
SHOX2O60902 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.66□□□□□ -2.14
SHOX2O60902 AC109445.1-201ENST00000512356 383 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.66□□□□□ -2.14
SHOX2O60902 AC009712.1-201ENST00000564938 316 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.66□□□□□ -2.14
SHOX2O60902 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.66□□□□□ -2.14
SHOX2O60902 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.66□□□□□ -2.14
SHOX2O60902 AC006270.3-201ENST00000605967 1036 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 RNU6-91P-201ENST00000607774 107 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 uc_338.5-201ENST00000611839 155 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 MIR6845-201ENST00000613182 61 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 MIR6134-201ENST00000617606 109 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AC138627.2-201ENST00000624202 601 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 AL359740.1-201ENST00000624340 592 ntBASIC1.66□□□□□ -2.14
SHOX2O60902 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHOX2O60902 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
SHOX2O60902 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHOX2O60902 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.65□□□□□ -2.14
SHOX2O60902 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.14
SHOX2O60902 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.65□□□□□ -2.15
SHOX2O60902 TEX21P-201ENST00000447107 1476 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHOX2O60902 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SHOX2O60902 RNU6-1284P-201ENST00000363701 100 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 RNU6-1257P-201ENST00000384625 110 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 MIR19A-201ENST00000384878 82 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 MIR561-201ENST00000385216 97 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 MIR320C1-201ENST00000408566 88 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 RN7SKP51-201ENST00000410781 304 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC127391.1-201ENST00000411737 98 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AP1B1P2-201ENST00000416196 106 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AL160275.3-201ENST00000423876 471 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 BRK1P2-201ENST00000442875 223 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC007327.1-201ENST00000447461 264 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.65□□□□□ -2.15
SHOX2O60902 snoU109.1-201ENST00000459339 135 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms