Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RPL23AP14-201ENST00000468281 468 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AC109925.1-201ENST00000478069 331 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RPL7P43-201ENST00000478876 753 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.91□□□□□ -1.94
ZIC3O60481 MIR892C-201ENST00000516410 77 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 RNU6-572P-201ENST00000516724 80 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.91□□□□□ -1.94
ZIC3O60481 H3F3AP1-201ENST00000559984 334 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 MIR5004-201ENST00000579078 107 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 MIR3942-201ENST00000585264 109 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 AL138880.2-201ENST00000616214 239 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AF117829.1-206ENST00000621883 3802 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.91□□□□□ -1.94
ZIC3O60481 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ZIC3O60481 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
ZIC3O60481 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.91□□□□□ -1.94
ZIC3O60481 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.9□□□□□ -1.94
ZIC3O60481 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
ZIC3O60481 SNORA9-201ENST00000384215 133 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AL356432.1-201ENST00000405809 419 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 SNORA11.1-201ENST00000408133 129 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 RNA5SP38-201ENST00000410750 119 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 Y_RNA.623-201ENST00000411128 95 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 BX679664.1-201ENST00000434429 253 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.9□□□□□ -1.95
ZIC3O60481 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.9□□□□□ -1.95
ZIC3O60481 HMGB3P8-201ENST00000449709 577 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 MTATP6P7-201ENST00000453315 681 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AC092798.1-201ENST00000458542 409 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 TRBVA-201ENST00000498804 316 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AC079140.5-201ENST00000507882 310 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 RNU1-103P-201ENST00000516502 125 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 RN7SKP57-201ENST00000517248 293 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.9□□□□□ -1.95
ZIC3O60481 AC026464.5-201ENST00000562497 722 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 FGF7P1-201ENST00000582820 288 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 MIR3672-201ENST00000584290 82 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AL161756.2-201ENST00000604597 246 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.9□□□□□ -1.95
ZIC3O60481 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 AC018692.3-201ENST00000623929 123 ntBASIC2.9□□□□□ -1.95
ZIC3O60481 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.9□□□□□ -1.95
ZIC3O60481 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ZIC3O60481 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
ZIC3O60481 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ZIC3O60481 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZIC3O60481 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZIC3O60481 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
ZIC3O60481 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZIC3O60481 RNU6-1252P-201ENST00000363054 104 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 Y_RNA.324-201ENST00000365165 102 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 Z98749.2-208ENST00000381646 500 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RNU1-73P-201ENST00000383971 164 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 MIR450B-201ENST00000401182 78 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RNA5SP31-201ENST00000411144 127 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RPL26P27-201ENST00000414397 437 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.89□□□□□ -1.95
ZIC3O60481 HMGN2P30-201ENST00000423237 256 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.89□□□□□ -1.95
ZIC3O60481 AC007560.1-201ENST00000426912 237 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL627311.1-201ENST00000431514 115 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.89□□□□□ -1.95
ZIC3O60481 RPS3AP12-201ENST00000443616 753 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL078601.1-201ENST00000444542 271 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.89□□□□□ -1.95
ZIC3O60481 AC010099.1-201ENST00000455434 375 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RN7SL863P-201ENST00000462370 296 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.89□□□□□ -1.95
ZIC3O60481 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.89□□□□□ -1.95
ZIC3O60481 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.89□□□□□ -1.95
ZIC3O60481 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.89□□□□□ -1.95
ZIC3O60481 SNORA70.24-201ENST00000517233 118 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AP000889.2-201ENST00000532684 490 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 RAB11AP2-201ENST00000545905 639 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL163153.1-201ENST00000554223 283 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AC005498.1-201ENST00000592125 465 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL117336.2-201ENST00000602435 335 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL355598.1-201ENST00000604169 202 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL022345.1-201ENST00000607292 135 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.89□□□□□ -1.95
ZIC3O60481 AC104985.2-201ENST00000620598 500 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 MIR8057-201ENST00000620957 69 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AC073476.4-201ENST00000628409 72 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AL133216.2-202ENST00000634512 349 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 AC099654.5-201ENST00000636479 350 ntBASIC2.89□□□□□ -1.95
ZIC3O60481 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ZIC3O60481 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZIC3O60481 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZIC3O60481 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
ZIC3O60481 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.88□□□□□ -1.95
ZIC3O60481 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms